PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0034s0029.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family ERF
Protein Properties Length: 300aa    MW: 32915.3 Da    PI: 4.9182
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0034s0029.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.5e-203383155
                  AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         s+y+GVr +  +g+Wv+eIr+p   +kr r++lg+f t+e+Aa+a++aa ++l+g
  Mapoly0034s0029.1.p 33 SRYRGVRMRA-WGKWVSEIREP---NKRSRIWLGSFPTPEMAARAYDAALLCLRG 83
                         79*****998.**********9...336*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.44E-213392IPR016177DNA-binding domain
PfamPF008474.3E-133383IPR001471AP2/ERF domain
CDDcd000182.66E-303391No hitNo description
PROSITE profilePS5103223.3933491IPR001471AP2/ERF domain
SMARTSM003808.6E-373497IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.3E-313492IPR001471AP2/ERF domain
PRINTSPR003671.7E-93546IPR001471AP2/ERF domain
PRINTSPR003671.7E-95773IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0034605Biological Processcellular response to heat
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071497Biological Processcellular response to freezing
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MVDKKRDNSP NSEHKRGANL LAPITPESGK KSSRYRGVRM RAWGKWVSEI REPNKRSRIW  60
LGSFPTPEMA ARAYDAALLC LRGPNAAFNF PKESSSLLSI LVSATDVEEP NFSKGERLKL  120
SHKDIQAAAA AAASTFAPDP SYSVKEEEDT VVISSSNSHD DMEKPTSSLE AADNDHSWDS  180
QNASSPDANC ADSQREAIAS WLASKSRQQK QQREEALAGV ARAGATHDGA MGQGRDWRSI  240
GGLEEDHCRP GFVEEMAHAM LVRLDPAAND YAMPQSTSFL CDDDSSDELL WEDNLWNFL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-152993974Ethylene-responsive transcription factor ERF096
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00156DAPTransfer from AT1G21910Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6X5Q10.0A0A2R6X5Q1_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67190.13e-28DREB and EAR motif protein 2