PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Mapoly0032s0010.1.p

Organism

Marchantia polymorpha

Taxonomic ID

3197

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia

Family

HB-other

Protein Properties

Length: 2056aa MW: 221515 Da PI: 4.9758

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Mapoly0032s0010.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	17.3	8e-06	746	795	7	56
--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 7 ftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++e l+ ++e+F+ + +++++e +e+++ +g t +qV+ +Fq +R k Mapoly0032s0010.1.p 746 PSAEALKSMKEVFAIKDTITKKEAREISSMTGATVTQVREFFQTQRNLVK 795 78999**************************************9997655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	9.9E-5	737	796	IPR009057	Homeodomain-like
SMART	SM00389	1.9E-4	739	801	IPR001356	Homeobox domain
SuperFamily	SSF46689	5.13E-6	740	802	IPR009057	Homeodomain-like
CDD	cd00086	7.23E-4	740	796	No hit	No description
Gene3D	G3DSA:1.20.930.10	1.2E-7	877	967	IPR017923	Transcription factor IIS, N-terminal
SuperFamily	SSF47676	1.07E-5	877	967	IPR017923	Transcription factor IIS, N-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006351	Biological Process	transcription, DNA-templated
GO:0009911	Biological Process	positive regulation of flower development
GO:0010228	Biological Process	vegetative to reproductive phase transition of meristem
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 2056 aa Download sequence Send to blast
MEPEADVHEG AGESSSFGSV LELGGEPRTE CTYSVPNEIN EGLAEMPEQN YGSSLDMTPD 60 IGRESYALRP GIEFSTDLRM ELSADVLASL GGSSNDVEKP PEDNLLDISS MREDLRTELQ 120 FIQELSMSPP PDPVNSSDPG NFTSEGANTH TEADSGAYGP VDSVSAEVQY DCAVPASTDS 180 DSPVHAQVDP TLGETVNDQV HPSVFETSAQ TPVEATSNMV SFAASLSFPM TSMNARTLEV 240 VGSTYYENCP VASGPDMLPS DRVVYHPVDV ASNSQSTNTT VTPLSVLDAT GGGNETSSPF 300 EVEGTASAIA LVTSDVNSCG DKDTKTTELE ESAVTYVPSS EEEACFFSVA VGTDSLQVPS 360 ERISPPAAER AQGLSPSSSP VDFSKNIHER PAVSGDDDVG QDVPVFPSTL TMGESCSLDS 420 GHLRDENSAV KLPELAALGS YGTGRFSGVA DHEVASSTAE GSAVIHVEKF QTESHSSFAQ 480 DLPEAQADLS NTCSADVLVV SAVQALPLFS RVEASEGNKQ IGFLHLPTQA PPLSSPSLVS 540 EMELHSSVNG QSSPPRDSSA PSGNVSPVAY APPYSPEPPV IQATPGSADA IISKSEAPAR 600 LEPSLLSPKA PRADSETSLL SARPGHFWDV PSSSGRSLPA LPTLSAYFDG SRSPFRGRKT 660 ARRKKSSESV FDSKGKTSGE MDRMDEVVEL ENMIEAQKKT MQWQIDELQR IMMKQCELTG 720 KNPLSEEMIY EVLGEKGADK KLGEVPSAEA LKSMKEVFAI KDTITKKEAR EISSMTGATV 780 TQVREFFQTQ RNLVKKLVQQ VYDETGRVGI KNASEQSQPS IPTISNNVGV ERDLGFHKLT 840 SIESVERSLE LMRAERTFFG QMQLLQIILQ TEAGALILRR FLEKGGLKVV GGWLVEAAAE 900 EQTSVLRQLL KVLGHLPISQ SVPHQMPALV QNVNKLRFYQ NSDISSQARA LLAMWSKMLK 960 QKTEAPKPAA AVTGKPTAAL ERNLASAPGV QKRNRETLSV THGGSGPRKK KAKEEETSQT 1020 DLKASGVPSM GSPSRNISGL VVVDPTVSNQ PSVPNPPPAA KQRWSHTLQP SESAVAAVSV 1080 SRKRVVSKSL GDHAKERRKL QLVEDKPAGK SFLTGGASKS SISKNSRPLS TDDIYKAKKL 1140 QRLMQEPLTK SRRKAAAAEE TSQTVDVDLK TVPKKSVPPS RPEQQDLSRG STGNTSVSDY 1200 QFLNKRVSST AGIIERTEVS KWETLASRLQ QDMYQPSITP TSSPDRGQRT ITPTASPDRP 1260 QLIITPIASP ERPPIEKPNS PPDLSEIVST PLSPEDIPQR VITSTSDRSQ GILSSAAILD 1320 SIPQKTYPKS TSVSADESQI FTPFSSNPGL MESVHHAMIP QQVQQPTDTL VPGFPFACKE 1380 PSDATVFPVG GEVVRPTENM PRDNPVSVTV TNTHPAFLDQ NHPSAPVSGQ LYPQMESGRP 1440 ATGVPLYTIP SPTPENEVEV KEGQQFVESS SSRFPPKEPA VIDFYAALRA NMIRWRIPAE 1500 FHLDPQWNVA AGEDSKEKEM QSARVKREEE AYYPDASTIP SDPKDPWEEE PNYDDSLTFE 1560 IFLDNNHRKA ASAMQISTDH MSAPTTNVMP SGIAPNSFMA EPSNNMFQPG SGYSAADSSV 1620 DQSRRVPNVS GLDLLLQQLS AGGGVAHDPA LLTLLLQNPD LVNQLTAGQG YPQSGNTTQN 1680 VFAPPLDSLK QSSNSGNLGV GLRTSAGDLG LDRVGASNIS VTMPPDTMRV EDSALKHSYS 1740 GMGHQQNPGF VTQVGVDNRY SAPPQMQPAV GSNSGWEQGR MPPLPPLPPP PPLPPMPSGG 1800 NQVLQSSVQP QANKVTNWPE PQQAWNSVGT VVGRPAVNTA QIHSGQELHM RPQNIMTHNV 1860 RPPNYGGMVP IPQVEVSSVV SQQEMHNASQ RQWTNAAHLV IAPSANDNSM IQAGQESGAG 1920 RNNRWPRPPG PPPPPPPPDP QMRPVGREYS DFQGNRQANV AENMTVWVPN ERGRPGPPPF 1980 QGSYRPPPPP PPPPYPAPQQ QHWQQTPERN VRPVQTSAVP PYPPHGRDLR TQQQPPQPWH 2040 PNMGPPPRPM WRGPQ*

Sequence ? help Back to Top

Protein Sequence Length: 2056 aa Download sequence Send to blast

MEPEADVHEG AGESSSFGSV LELGGEPRTE CTYSVPNEIN EGLAEMPEQN YGSSLDMTPD  60
IGRESYALRP GIEFSTDLRM ELSADVLASL GGSSNDVEKP PEDNLLDISS MREDLRTELQ  120
FIQELSMSPP PDPVNSSDPG NFTSEGANTH TEADSGAYGP VDSVSAEVQY DCAVPASTDS  180
DSPVHAQVDP TLGETVNDQV HPSVFETSAQ TPVEATSNMV SFAASLSFPM TSMNARTLEV  240
VGSTYYENCP VASGPDMLPS DRVVYHPVDV ASNSQSTNTT VTPLSVLDAT GGGNETSSPF  300
EVEGTASAIA LVTSDVNSCG DKDTKTTELE ESAVTYVPSS EEEACFFSVA VGTDSLQVPS  360
ERISPPAAER AQGLSPSSSP VDFSKNIHER PAVSGDDDVG QDVPVFPSTL TMGESCSLDS  420
GHLRDENSAV KLPELAALGS YGTGRFSGVA DHEVASSTAE GSAVIHVEKF QTESHSSFAQ  480
DLPEAQADLS NTCSADVLVV SAVQALPLFS RVEASEGNKQ IGFLHLPTQA PPLSSPSLVS  540
EMELHSSVNG QSSPPRDSSA PSGNVSPVAY APPYSPEPPV IQATPGSADA IISKSEAPAR  600
LEPSLLSPKA PRADSETSLL SARPGHFWDV PSSSGRSLPA LPTLSAYFDG SRSPFRGRKT  660
ARRKKSSESV FDSKGKTSGE MDRMDEVVEL ENMIEAQKKT MQWQIDELQR IMMKQCELTG  720
KNPLSEEMIY EVLGEKGADK KLGEVPSAEA LKSMKEVFAI KDTITKKEAR EISSMTGATV  780
TQVREFFQTQ RNLVKKLVQQ VYDETGRVGI KNASEQSQPS IPTISNNVGV ERDLGFHKLT  840
SIESVERSLE LMRAERTFFG QMQLLQIILQ TEAGALILRR FLEKGGLKVV GGWLVEAAAE  900
EQTSVLRQLL KVLGHLPISQ SVPHQMPALV QNVNKLRFYQ NSDISSQARA LLAMWSKMLK  960
QKTEAPKPAA AVTGKPTAAL ERNLASAPGV QKRNRETLSV THGGSGPRKK KAKEEETSQT  1020
DLKASGVPSM GSPSRNISGL VVVDPTVSNQ PSVPNPPPAA KQRWSHTLQP SESAVAAVSV  1080
SRKRVVSKSL GDHAKERRKL QLVEDKPAGK SFLTGGASKS SISKNSRPLS TDDIYKAKKL  1140
QRLMQEPLTK SRRKAAAAEE TSQTVDVDLK TVPKKSVPPS RPEQQDLSRG STGNTSVSDY  1200
QFLNKRVSST AGIIERTEVS KWETLASRLQ QDMYQPSITP TSSPDRGQRT ITPTASPDRP  1260
QLIITPIASP ERPPIEKPNS PPDLSEIVST PLSPEDIPQR VITSTSDRSQ GILSSAAILD  1320
SIPQKTYPKS TSVSADESQI FTPFSSNPGL MESVHHAMIP QQVQQPTDTL VPGFPFACKE  1380
PSDATVFPVG GEVVRPTENM PRDNPVSVTV TNTHPAFLDQ NHPSAPVSGQ LYPQMESGRP  1440
ATGVPLYTIP SPTPENEVEV KEGQQFVESS SSRFPPKEPA VIDFYAALRA NMIRWRIPAE  1500
FHLDPQWNVA AGEDSKEKEM QSARVKREEE AYYPDASTIP SDPKDPWEEE PNYDDSLTFE  1560
IFLDNNHRKA ASAMQISTDH MSAPTTNVMP SGIAPNSFMA EPSNNMFQPG SGYSAADSSV  1620
DQSRRVPNVS GLDLLLQQLS AGGGVAHDPA LLTLLLQNPD LVNQLTAGQG YPQSGNTTQN  1680
VFAPPLDSLK QSSNSGNLGV GLRTSAGDLG LDRVGASNIS VTMPPDTMRV EDSALKHSYS  1740
GMGHQQNPGF VTQVGVDNRY SAPPQMQPAV GSNSGWEQGR MPPLPPLPPP PPLPPMPSGG  1800
NQVLQSSVQP QANKVTNWPE PQQAWNSVGT VVGRPAVNTA QIHSGQELHM RPQNIMTHNV  1860
RPPNYGGMVP IPQVEVSSVV SQQEMHNASQ RQWTNAAHLV IAPSANDNSM IQAGQESGAG  1920
RNNRWPRPPG PPPPPPPPDP QMRPVGREYS DFQGNRQANV AENMTVWVPN ERGRPGPPPF  1980
QGSYRPPPPP PPPPYPAPQQ QHWQQTPERN VRPVQTSAVP PYPPHGRDLR TQQQPPQPWH  2040
PNMGPPPRPM WRGPQ*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2R6X6S7	0.0	A0A2R6X6S7_MARPO; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP4121	13	15

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	6e-44	HB-other family protein

Link Out ? help Back to Top
Phytozome	Mapoly0032s0010.1.p