PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Mapoly0032s0010.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
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Family | HB-other | ||||||||
Protein Properties | Length: 2056aa MW: 221515 Da PI: 4.9758 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 17.3 | 8e-06 | 746 | 795 | 7 | 56 |
--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 7 ftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++e l+ ++e+F+ + +++++e +e+++ +g t +qV+ +Fq +R k Mapoly0032s0010.1.p 746 PSAEALKSMKEVFAIKDTITKKEAREISSMTGATVTQVREFFQTQRNLVK 795 78999**************************************9997655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 9.9E-5 | 737 | 796 | IPR009057 | Homeodomain-like |
SMART | SM00389 | 1.9E-4 | 739 | 801 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 5.13E-6 | 740 | 802 | IPR009057 | Homeodomain-like |
CDD | cd00086 | 7.23E-4 | 740 | 796 | No hit | No description |
Gene3D | G3DSA:1.20.930.10 | 1.2E-7 | 877 | 967 | IPR017923 | Transcription factor IIS, N-terminal |
SuperFamily | SSF47676 | 1.07E-5 | 877 | 967 | IPR017923 | Transcription factor IIS, N-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006351 | Biological Process | transcription, DNA-templated | ||||
GO:0009911 | Biological Process | positive regulation of flower development | ||||
GO:0010228 | Biological Process | vegetative to reproductive phase transition of meristem | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 2056 aa Download sequence Send to blast |
MEPEADVHEG AGESSSFGSV LELGGEPRTE CTYSVPNEIN EGLAEMPEQN YGSSLDMTPD 60 IGRESYALRP GIEFSTDLRM ELSADVLASL GGSSNDVEKP PEDNLLDISS MREDLRTELQ 120 FIQELSMSPP PDPVNSSDPG NFTSEGANTH TEADSGAYGP VDSVSAEVQY DCAVPASTDS 180 DSPVHAQVDP TLGETVNDQV HPSVFETSAQ TPVEATSNMV SFAASLSFPM TSMNARTLEV 240 VGSTYYENCP VASGPDMLPS DRVVYHPVDV ASNSQSTNTT VTPLSVLDAT GGGNETSSPF 300 EVEGTASAIA LVTSDVNSCG DKDTKTTELE ESAVTYVPSS EEEACFFSVA VGTDSLQVPS 360 ERISPPAAER AQGLSPSSSP VDFSKNIHER PAVSGDDDVG QDVPVFPSTL TMGESCSLDS 420 GHLRDENSAV KLPELAALGS YGTGRFSGVA DHEVASSTAE GSAVIHVEKF QTESHSSFAQ 480 DLPEAQADLS NTCSADVLVV SAVQALPLFS RVEASEGNKQ IGFLHLPTQA PPLSSPSLVS 540 EMELHSSVNG QSSPPRDSSA PSGNVSPVAY APPYSPEPPV IQATPGSADA IISKSEAPAR 600 LEPSLLSPKA PRADSETSLL SARPGHFWDV PSSSGRSLPA LPTLSAYFDG SRSPFRGRKT 660 ARRKKSSESV FDSKGKTSGE MDRMDEVVEL ENMIEAQKKT MQWQIDELQR IMMKQCELTG 720 KNPLSEEMIY EVLGEKGADK KLGEVPSAEA LKSMKEVFAI KDTITKKEAR EISSMTGATV 780 TQVREFFQTQ RNLVKKLVQQ VYDETGRVGI KNASEQSQPS IPTISNNVGV ERDLGFHKLT 840 SIESVERSLE LMRAERTFFG QMQLLQIILQ TEAGALILRR FLEKGGLKVV GGWLVEAAAE 900 EQTSVLRQLL KVLGHLPISQ SVPHQMPALV QNVNKLRFYQ NSDISSQARA LLAMWSKMLK 960 QKTEAPKPAA AVTGKPTAAL ERNLASAPGV QKRNRETLSV THGGSGPRKK KAKEEETSQT 1020 DLKASGVPSM GSPSRNISGL VVVDPTVSNQ PSVPNPPPAA KQRWSHTLQP SESAVAAVSV 1080 SRKRVVSKSL GDHAKERRKL QLVEDKPAGK SFLTGGASKS SISKNSRPLS TDDIYKAKKL 1140 QRLMQEPLTK SRRKAAAAEE TSQTVDVDLK TVPKKSVPPS RPEQQDLSRG STGNTSVSDY 1200 QFLNKRVSST AGIIERTEVS KWETLASRLQ QDMYQPSITP TSSPDRGQRT ITPTASPDRP 1260 QLIITPIASP ERPPIEKPNS PPDLSEIVST PLSPEDIPQR VITSTSDRSQ GILSSAAILD 1320 SIPQKTYPKS TSVSADESQI FTPFSSNPGL MESVHHAMIP QQVQQPTDTL VPGFPFACKE 1380 PSDATVFPVG GEVVRPTENM PRDNPVSVTV TNTHPAFLDQ NHPSAPVSGQ LYPQMESGRP 1440 ATGVPLYTIP SPTPENEVEV KEGQQFVESS SSRFPPKEPA VIDFYAALRA NMIRWRIPAE 1500 FHLDPQWNVA AGEDSKEKEM QSARVKREEE AYYPDASTIP SDPKDPWEEE PNYDDSLTFE 1560 IFLDNNHRKA ASAMQISTDH MSAPTTNVMP SGIAPNSFMA EPSNNMFQPG SGYSAADSSV 1620 DQSRRVPNVS GLDLLLQQLS AGGGVAHDPA LLTLLLQNPD LVNQLTAGQG YPQSGNTTQN 1680 VFAPPLDSLK QSSNSGNLGV GLRTSAGDLG LDRVGASNIS VTMPPDTMRV EDSALKHSYS 1740 GMGHQQNPGF VTQVGVDNRY SAPPQMQPAV GSNSGWEQGR MPPLPPLPPP PPLPPMPSGG 1800 NQVLQSSVQP QANKVTNWPE PQQAWNSVGT VVGRPAVNTA QIHSGQELHM RPQNIMTHNV 1860 RPPNYGGMVP IPQVEVSSVV SQQEMHNASQ RQWTNAAHLV IAPSANDNSM IQAGQESGAG 1920 RNNRWPRPPG PPPPPPPPDP QMRPVGREYS DFQGNRQANV AENMTVWVPN ERGRPGPPPF 1980 QGSYRPPPPP PPPPYPAPQQ QHWQQTPERN VRPVQTSAVP PYPPHGRDLR TQQQPPQPWH 2040 PNMGPPPRPM WRGPQ* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2R6X6S7 | 0.0 | A0A2R6X6S7_MARPO; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP4121 | 13 | 15 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G02560.2 | 6e-44 | HB-other family protein |
Link Out ? help Back to Top | |
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Phytozome | Mapoly0032s0010.1.p |