PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0031s0170.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family WRKY
Protein Properties Length: 307aa    MW: 34334.1 Da    PI: 10.419
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0031s0170.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.27.9e-29240296257
                          --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--S CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHn 57 
                           D y+WrKYGqK++k+s++prsYYrC+ + gCp++k+ver+++dp+++ itY+g+H+
  Mapoly0031s0170.1.p 240 ADDYAWRKYGQKPIKDSNYPRSYYRCSITkGCPARKHVERCSKDPTMLMITYSGDHK 296
                          69*************************999**************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.3E-29233296IPR003657WRKY domain
PROSITE profilePS5081125.901234295IPR003657WRKY domain
SuperFamilySSF1182902.75E-24237296IPR003657WRKY domain
SMARTSM007744.7E-31239300IPR003657WRKY domain
PfamPF031069.0E-24241296IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MWLKMAVELR EANGGSNRCE DVYTLQTNLR ELMQQLQDET QSSFLSRDKF AQLQKAKTAL  60
STVSRRGHAR VRRRQPKVGT MVAGGVSLDL LVEAPSFRVA ESLNPVFTTP PRPKSADKGD  120
SLGHSVANVL YVGQFANQDP SSHLNLPQIN NLSCGGYNNA MQLIQQLEIP HSYKSGWKVP  180
IPATLRRNSF GKKARHKICD GGKNFAFRNG SRNVKKRIQR NTSNTIVVPA ISDRLADIPA  240
DDYAWRKYGQ KPIKDSNYPR SYYRCSITKG CPARKHVERC SKDPTMLMIT YSGDHKDCYG  300
PRSCSL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-182352951069WRKY transcription factor 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6X7Y20.0A0A2R6X7Y2_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.13e-34WRKY DNA-binding protein 21