PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0029s0145.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family HB-other
Protein Properties Length: 371aa    MW: 41459.4 Da    PI: 4.4713
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0029s0145.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox21.83.1e-07311358653
                          S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
             Homeobox   6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                          +++ke + + e++F++++ p+ ++++ L + ++++ +++  WF  +R+
  Mapoly0029s0145.1.p 311 RLKKEHVATFERVFRRTKRPTNAMIQNLVELTHVPRKRIVEWFDHKRQ 358
                          5789999****************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003890.0041302367IPR001356Homeobox domain
PROSITE profilePS500718.827303363IPR001356Homeobox domain
CDDcd000864.77E-5309358No hitNo description
SuperFamilySSF466894.71E-7310361IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.2E-7310364IPR009057Homeodomain-like
PfamPF000469.9E-5311358IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0002229Biological Processdefense response to oomycetes
GO:0009414Biological Processresponse to water deprivation
GO:0009682Biological Processinduced systemic resistance
GO:0009787Biological Processregulation of abscisic acid-activated signaling pathway
GO:0010118Biological Processstomatal movement
GO:0050832Biological Processdefense response to fungus
GO:2000022Biological Processregulation of jasmonic acid mediated signaling pathway
GO:2000071Biological Processregulation of defense response by callose deposition
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MGLMAMAVQS ASFCSFSTRP PVAASAWSEW RGVPLRREII GLVKFGIRKK TLQVVSRRGG  60
GGGRGGPAKP RNVSPRGRSV QQQQQEALPK SLIAKKTRQE EEDEEDALAE AALEALFAQL  120
EKDLEDGAMS EDDDDDEDFT EEEVIALEDE LEAALLGLDY EQQTVIDSEA GKSEVGPSQS  180
KRLAKEDAEL ILDDEEEDEE EQRVVSLETW QLKKLAAAAE IGRRNINVKA LAAEVGMDRS  240
DVLAWLKNPP PELLMLGATM GLEEDSEDAD QVNEESEDAA SRTPAKISTS TNKQIPESQG  300
FAPETWYNQK RLKKEHVATF ERVFRRTKRP TNAMIQNLVE LTHVPRKRIV EWFDHKRQEL  360
DPSQRLEPLR *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6X9720.0A0A2R6X972_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP69271618
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.15e-34overexpressor of cationic peroxidase 3