PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0028s0062.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family bHLH
Protein Properties Length: 701aa    MW: 76899.9 Da    PI: 5.9837
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0028s0062.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.61.1e-13473518454
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                          +h  +ErrRR + N+ f++L+ l+P+a     +K++Ka++L +++ YI+sL
  Mapoly0028s0062.1.p 473 SHMLAERRRRIKQNENFSQLKALIPSA-----TKMDKATVLAETIVYINSL 518
                          7999***********************.....9****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142157.3E-174149IPR025610Transcription factor MYC/MYB N-terminal
SuperFamilySSF474595.37E-15464533IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.186469518IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.15E-13472523No hitNo description
PfamPF000106.2E-11473518IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-16473533IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.6E-12475524IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 701 aa     Download sequence    Send to blast
MAELNTTLWD LLQTIQWSYA ALWTLTPDRR MLKWQEGWFN LKAAGDSNGS DSDNKNAELF  60
YFLYNQLTFA PGVGFAGHAL QHMGDRILWL AGDMALGSIP NPVEKQSFFI KAAGIQTTIC  120
IPLEDKVLEL GTINLVPEND EIAHCIKKIM YSLLDRYLKK PEPCHFPDIQ FGLEMNNLTP  180
TSSGAGPSMV IPLPNDFSSL SSKPMNLMAM NLPTVYDDLD ASYIVPPVAM SAPELMQSRL  240
SWTPEQLSMP LGHNDLDIWS TASTLAALQS HGISTSSASS TLMVDHIEQA LPGFTLPMPF  300
IESDVTLLAP SPSPPIVEAT TSLRDRSSSR SSLRSGAHLE DNEISSVAKV YADCQISEPK  360
LVAEAGRESD SRVSSGRLRR SPSPKEMSPD SLSSLPKPRA PSHGLQQPLM FHPGSTSEPS  420
HQRPRLERQN SSTLKPADST PVLVQLGNVL QLGNASGQVA EAPPQETDEA AVSHMLAERR  480
RRIKQNENFS QLKALIPSAT KMDKATVLAE TIVYINSLKA RLEALEQCNQ SLKFLIGDRA  540
TDIAGPSNAP AIRLPTPPVP SSREPERVEV TPDGEGNLRI EIRSPCAQPE NAIHILTSLK  600
QMQLRVLSSQ MSIDDNRITA TFVVKVRQTG YGMDIALICL MIHNAKIPIQ WNDSLSFTIF  660
TRLVCVCVCV FGSTCFWYPL RIIDLDSSSL CHPYAAGRHP *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6X9G20.0A0A2R6X9G2_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1163137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09820.14e-14bHLH family protein