PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0027s0069.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family WRKY
Protein Properties Length: 570aa    MW: 61452.3 Da    PI: 9.0508
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0027s0069.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.19.8e-30317376159
                          ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                          ++Dg++WrKYGqK  kg+++pr+YYrCt a gCpv+k+v+r+aed +v+++tYeg+H h+
  Mapoly0027s0069.1.p 317 MNDGCQWRKYGQKLAKGNPCPRAYYRCTVApGCPVRKQVQRCAEDRSVLTTTYEGTHSHP 376
                          58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.9E-32302378IPR003657WRKY domain
SuperFamilySSF1182902.22E-27309378IPR003657WRKY domain
PROSITE profilePS5081128.059312378IPR003657WRKY domain
SMARTSM007741.4E-35317377IPR003657WRKY domain
PfamPF031061.0E-26318376IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 570 aa     Download sequence    Send to blast
MAHSVSSEVP HFLQPSKTAT VASQFVSLSA GQRKADAPTT TKQYLENKNP PAMKEHDKTN  60
MKIESSPASP ERSSPDDNVI KIQLKRTRNE MERMVQENQQ MKKMLTFMTV EYNFLHKHLI  120
TTVSQQQEQA IGKSSQLLQN YKPITEFVRA TVLTERASPP STSTTSGSTD RSRSPSPQPT  180
ASAPIRSTSS DRATETNLEK QSSSLQKVDA KIIQAEHAVI PGDSDKDGFI QYRAQKDSSQ  240
SDISLVEPTL RLASPGQDSS AEARESHSNK EAAAISEPSL SEQNGWPPTK RMKSVLQDTS  300
VRSARVSVRT RTDAPTMNDG CQWRKYGQKL AKGNPCPRAY YRCTVAPGCP VRKQVQRCAE  360
DRSVLTTTYE GTHSHPLPAA AMAMASTTSA ASGMLVMGCT SSDRIAEGLG LRCDSAMNMG  420
ISNISASIPF PSITLDLTGP ESCSLAAAAA KRIQQLDATG ARANDWPYKF LFSPFGIPMH  480
APPISMMPGA QSAFCGTDKR DFHMASGLNP LMVRSQQAHG LEMGPKMLAD SSWLTPATAA  540
ITSDPNFTAA LASAIASIIG SQTNGHLVT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A8e-22304378174WRKY transcription factor 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A176VUU60.0A0A176VUU6_MARPO; Uncharacterized protein
TrEMBLA0A2R6XA150.0A0A2R6XA15_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04450.17e-45WRKY family protein