PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0026s0097.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family ERF
Protein Properties Length: 201aa    MW: 22607.5 Da    PI: 5.013
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0026s0097.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2452.7e-141457754
                  AP2  7 rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
                         r++k +g+WvAeIrdp +   +kr +lg+fg +eeAa+a+ + +++l 
  Mapoly0026s0097.1.p 14 RQRK-WGKWVAEIRDPAT---KKRAWLGTFGNKEEAAAAYRRKALELL 57
                         5666.**********843...4**********************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.15E-19856No hitNo description
SMARTSM003801.0E-13974IPR001471AP2/ERF domain
PROSITE profilePS5103216.344973IPR001471AP2/ERF domain
PRINTSPR003673.0E-61021IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.0E-181058IPR001471AP2/ERF domain
SuperFamilySSF541712.03E-141361IPR016177DNA-binding domain
PfamPF008471.3E-71456IPR001471AP2/ERF domain
PRINTSPR003673.0E-63248IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    Send to blast
MGCGNSRPSY EKARQRKWGK WVAEIRDPAT KKRAWLGTFG NKEEAAAAYR RKALELLDHQ  60
PSTSTKLTAT NTPLFSVPLH TLFSRKDDMV CQVGTAYMCN ELQEAQPGHH QHIPLEEVLH  120
LAEPVNGQSS LSPAATNTHL EESVTLNEKL ENIEPGVGNL MIEDIWEVLP MLVEEKDGEE  180
LDFEEYVKEL DAKSFFPSRF *
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A176VKR61e-148A0A176VKR6_MARPO; Uncharacterized protein
TrEMBLA0A2R6XAX51e-148A0A2R6XAX5_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.17e-11cytokinin response factor 4