PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0020s0051.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family NAC
Protein Properties Length: 658aa    MW: 72634.1 Da    PI: 4.432
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0020s0051.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM163.86.4e-51151431128
                  NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                          l+pGfrFhPtdeelv +yLk+k+++k++++ +v++ vd+yk+ePwdL  +  + + ++ewyfFs+rdkky++g r+nrat++gyWkatgk
  Mapoly0020s0051.1.p  15 LAPGFRFHPTDEELVGYYLKRKIQRKPIPE-NVVAVVDLYKWEPWDLAgMsLIVTPDSEWYFFSPRDKKYPNGLRTNRATEAGYWKATGK 103
                          579**************************9.99**************85345556889******************************** PP

                  NAM  89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                          d++v++++++++g kktLvfy+grap+ge+td vmheyr 
  Mapoly0020s0051.1.p 104 DRNVKRQGKNVIGAKKTLVFYRGRAPHGERTDYVMHEYRW 143
                          **************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.09E-5713164IPR003441NAC domain
PROSITE profilePS5100557.0115164IPR003441NAC domain
PfamPF023652.9E-2717142IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 658 aa     Download sequence    Send to blast
MADRSIPALN ESGMLAPGFR FHPTDEELVG YYLKRKIQRK PIPENVVAVV DLYKWEPWDL  60
AGMSLIVTPD SEWYFFSPRD KKYPNGLRTN RATEAGYWKA TGKDRNVKRQ GKNVIGAKKT  120
LVFYRGRAPH GERTDYVMHE YRWEEEEAVD FSQDAFVLCR VFKKSGPGPR SPEDRGPPTY  180
VDDDDVVPEQ RSRPPVLPTT SNSPALNEAE VMEEAEIVQA ETPPPVISVH DYQSDLAPVV  240
VDAPSSVHVP TTQSSFHQDE EDRFWDCILD NYPEGDYGSS GFPISSTVAT GFAPVGESNL  300
YWELMQQELA DESQDLPPLE EEQELHGSDM RQCRPRRVRN GDDTNVVRSI ESNIPHEVPP  360
PQIDASDQSL AWTFPPPGGS SEQNTSGVHI PSSSILSSSS YAGEGLSGNV ENNEPMFEEA  420
YDTFADTFLV DFSEHDNSFS LPTLNDPVED NGPQNSWSQH DPRSDLPSVS TNAGYQQPSI  480
SLSYDSMSPE AVTDDGTMSS KPLVASILKY LGSIPALPAS AAEFPPDHKI SHLGELSPSY  540
NSIHVSAAVT VTCTRSADGK QQVQTAVTDC YGDSEGVYEQ EVFNSWQSIT DGKGAVQQGS  600
EKQTHTVVGT RTQRRVVRGS NSGFVFVFVL GVASTLMWFL AAQGTYRIAR HIVTSIF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A5e-441516415168Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6XE610.0A0A2R6XE61_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1715800
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.12e-64NAC domain containing protein 28