PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0020s0001.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family ERF
Protein Properties Length: 272aa    MW: 30499.6 Da    PI: 9.5856
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0020s0001.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.93.9e-113669340
                  AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtae 40
                          +GVr++  + +W +eIrdp +   r+r++lg+f t+e
  Mapoly0020s0001.1.p 36 LRGVRQRT-WDKWMVEIRDPGN---RRRVWLGTFNTKE 69
                         69***999.**********833...5**********65 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.1E-43578IPR001471AP2/ERF domain
PROSITE profilePS5103213.0633569IPR001471AP2/ERF domain
PfamPF008471.7E-63569IPR001471AP2/ERF domain
SuperFamilySSF541714.97E-93669IPR016177DNA-binding domain
PRINTSPR003678.0E-53647IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.2E-143769IPR001471AP2/ERF domain
CDDcd000184.91E-133769No hitNo description
PRINTSPR003678.0E-55874IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MRCVAEELIQ NQLTALLQPS LPYELFIDSI DAQPSLRGVR QRTWDKWMVE IRDPGNRRRV  60
WLGTFNTKEG FENGQKIPRD DNVQCKDAYR PTPLPSERKA KKFNETKLLS PKESPLFSSE  120
AEDNSRSSRS PTFNSSSSER TAPTTPPPPI PPTNLMPGTY SADCSQIYFT HLSSAKVERG  180
SPADIRLSIG SRSDPLATGL VYAKRDSCLN EKIRSRLLMY LRASVRARDL PQPVIEHAAI  240
SMTCGLQLYL HQIRPDLREG KDIVKTSPSA N*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6XDZ70.0A0A2R6XDZ7_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39780.16e-13ERF family protein