PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0016s0110.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family bHLH
Protein Properties Length: 402aa    MW: 45367.6 Da    PI: 6.5128
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0016s0110.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.72e-08340389654
                          HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHH CS
                  HLH   6 nerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksL 54 
                          +++Er RR+ri ++   L   lP ++k ++k+ l   eiLe++v+YIk L
  Mapoly0016s0110.1.p 340 SIAERVRRSRIAERVKILEAKLPYPTKKKGKRtLHTDEILERTVNYIKWL 389
                          589*********************999999999**************966 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.331334389IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.01E-9338399IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.48E-4338391No hitNo description
Gene3DG3DSA:4.10.280.102.8E-8339400IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.0095340395IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-5340389IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    Send to blast
MDGLKPPEVA ASAEASTSAF YANADTSSSD MKCKHFATRE TSGQDPWIEE KIPESPIMGS  60
TTCLSQDENR DTSYVPCLML SENFYDSRGT LTNQQTTCWE MDRSRVLQHA TSHSEKHTEL  120
PARSTPGDLS WTSLNNITSS RYPSNLDVKI KRVDANVNAH YTGTRNESEI LADNTPFVGR  180
DLSVPNKESL KMSDVYDEDI EHSRNSTLLN LNKTFIDHQV SCEGSYIRSN NVHVERVVVQ  240
SSKNIYGEAS RIKPTEQNDI HQKFKSILTK VPRNSKESKE MSVEQLQSMD LLTNKDAVSS  300
SCTSISEENF NTTPESKDPE LFSEHCSYRA ARGCAVHPRS IAERVRRSRI AERVKILEAK  360
LPYPTKKKGK RTLHTDEILE RTVNYIKWLE ECIKMLQSEI S*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A176WB510.0A0A176WB51_MARPO; Uncharacterized protein
TrEMBLA0A2R6XG230.0A0A2R6XG23_MARPO; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.19e-14bHLH family protein