PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0015s0003.5.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family bHLH
Protein Properties Length: 440aa    MW: 48444.9 Da    PI: 7.3335
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0015s0003.5.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.95.8e-11265305954
                          HHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                  HLH   9 ErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                          Er+RR+++N+++  Lr+++P+ +      K++Ka+i   A++Y+ +L
  Mapoly0015s0003.5.p 265 ERKRRKKMNDGLYSLRSIVPNiS------KMDKASIIGDAIKYVMEL 305
                          9********************66......**************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.869256305IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.89E-16260318IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.8E-14262311IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.56E-11264310No hitNo description
Gene3DG3DSA:4.10.280.105.1E-15264322IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.4E-9265306IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048730.00675397428No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    Send to blast
MHSIVGRGRR PAFREEQGWK EHSSPHTPLS PNFHADPLFG TPSGSLQDIL RSVHMVEGSA  60
FVSVPKSSGS QAPPDIIAPQ QQQQVSSTAR NVSVDAPVID DGLGKLQRKQ LQCHTSSSWD  120
HNMRNEHVFE GYPHVGLADI SNTQLQLDSF KPVGTWTDTP GADHEQQWTD LRRSSKTTML  180
SPGPNLDSGT CQPSVWRERW SDSSRVHASS HQERHRAAAP AAGAAAAAAH LEESTDGGSD  240
PMDEKNSRRF SNTAGYCSSR NLFSERKRRK KMNDGLYSLR SIVPNISKMD KASIIGDAIK  300
YVMELERQVK ELEGEMELDE QRKNKINSSS DTLGSLAATG VQHGGDAAAQ NDKDVDWNKN  360
SGGNVSKLDT KDQPNVTLEL SKMKTGMYNL RMFYQQQPGI FMHMTQAIES LDLNILNSHV  420
STCDGYVVHS MIAKKSRIA*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6XGE00.0A0A2R6XGE0_MARPO; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16910.14e-22bHLH family protein