PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0011s0176.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family NAC
Protein Properties Length: 842aa    MW: 93280 Da    PI: 5.6336
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0011s0176.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1752.2e-5461341128
                  NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                          lppGfrFhPtdeelv++yL+++v+g +l+  +vi++vd+yk+ePwdLp k ++ + ++ew+fFs+rd+ky++g+r+nrat++gyWkatg+
  Mapoly0011s0176.1.p   6 LPPGFRFHPTDEELVDHYLTNRVKGIPLSY-KVIADVDLYKCEPWDLPsKsSLPQVDHEWFFFSPRDRKYPNGSRTNRATEAGYWKATGR 94 
                          79**************************99.99***************4344555778******************************** PP

                  NAM  89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                          d++v++++++++g+kktLvfy+grap+ge+tdW+mheyrl
  Mapoly0011s0176.1.p  95 DRTVKKESKKTIGMKKTLVFYRGRAPHGERTDWLMHEYRL 134
                          **************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.14E-623157IPR003441NAC domain
PROSITE profilePS5100561.2776157IPR003441NAC domain
PfamPF023651.5E-287134IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 842 aa     Download sequence    Send to blast
MPGMTLPPGF RFHPTDEELV DHYLTNRVKG IPLSYKVIAD VDLYKCEPWD LPSKSSLPQV  60
DHEWFFFSPR DRKYPNGSRT NRATEAGYWK ATGRDRTVKK ESKKTIGMKK TLVFYRGRAP  120
HGERTDWLMH EYRLDGEDFQ KMNVPQDAFV LCRVFKKNGF GPPKNPSGGS GSMEEVVDQV  180
DSPGEVKSSP FSENDVKPSM TSLANLAPLS QQLSSPQEGL SENHIMNGVV DNFVGRSSGP  240
FMDDLFVPNE NFTRPTRSSE ADNSEFSLDE GLEKRNHQKL LDDFYAICPP LDGGGMAPLE  300
DLDPYTDIPG LIDSTKIVRT EFNNKWQEQV AYQEQVNGVY NAWDGVQSLP KHEEQLIFPT  360
HYENDFGPLP TLVQLPSPPT QTSFDDNDTE SSSTPSSNNH FTTFQRRTRP SVISPIAAGG  420
YSSPYTAKRR VLLQHRGPVT VPIADLAAEK PSEAKSSLVL KAETVELKLS SDTQATSAEE  480
SQVESEVANR QDSTWATNVI TAPLSDDSSD DRGDDVSRSS VSCTINSSEL AAGSPIQLIK  540
PVSAQPVSDD TSSVHKVSSD ASPPRVDVGS RDFESGNVRE KQESVSEIES GHSSAAHAST  600
SDVDKSNCHS VEPTCEAAVF NQGETPGYLK KGYVNNSEVM RHMGLGLFEP ISALRPADLK  660
STGRFLPASL KKQVTSRELP AGIGSIHVNA VTVTCSCSSA GRPHVPTKAC ACYPTFWEGR  720
CEKDTSTKQD CSEAERSETR DEILSRFKRH KGFECLLLLL VVHMVCSILE YRRGHYSFLL  780
HFGDSDFSER FFSSLPRLFR DLLFATFGAM FLYLFQRRSV PWRSIFTRTA VNSEPSSASI  840
F*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A3e-51415718168NAC domain-containing protein 19
3swm_B3e-51415718168NAC domain-containing protein 19
3swm_C3e-51415718168NAC domain-containing protein 19
3swm_D3e-51415718168NAC domain-containing protein 19
3swp_A3e-51415718168NAC domain-containing protein 19
3swp_B3e-51415718168NAC domain-containing protein 19
3swp_C3e-51415718168NAC domain-containing protein 19
3swp_D3e-51415718168NAC domain-containing protein 19
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00212DAPTransfer from AT1G65910Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A176WDG20.0A0A176WDG2_MARPO; Uncharacterized protein
TrEMBLA0A2R6XKC80.0A0A2R6XKC8_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1715800
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.18e-66NAC domain containing protein 28