PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0008s0159.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family WRKY
Protein Properties Length: 755aa    MW: 80722 Da    PI: 8.0412
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0008s0159.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY105.62.5e-33345402260
                          --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                          +DgynWrKYGqK+vkgsefprsYY+Ct+a+Cp+kkkvers  d++v+ei+Y+geHnh+k
  Mapoly0008s0159.1.p 345 EDGYNWRKYGQKQVKGSEFPRSYYKCTHATCPMKKKVERSL-DGQVTEIVYKGEHNHPK 402
                          7****************************************.***************85 PP
2WRKY106.41.4e-33536594159
                          ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                          ldDgy+WrKYGqK+vkg+++prsYY+Ct +gCpv+k+ver+++dpk+v++tYeg+Hnh+
  Mapoly0008s0159.1.p 536 LDDGYRWRKYGQKVVKGNPHPRSYYKCTNQGCPVRKHVERASNDPKAVITTYEGKHNHD 594
                          59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.8E-29336403IPR003657WRKY domain
SuperFamilySSF1182903.92E-25342403IPR003657WRKY domain
SMARTSM007743.8E-37344402IPR003657WRKY domain
PROSITE profilePS5081123.697345403IPR003657WRKY domain
PfamPF031064.2E-26345401IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.7E-38521596IPR003657WRKY domain
SuperFamilySSF1182904.45E-30528596IPR003657WRKY domain
PROSITE profilePS5081138.893531596IPR003657WRKY domain
SMARTSM007741.1E-40536595IPR003657WRKY domain
PfamPF031067.5E-27537594IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009611Biological Processresponse to wounding
GO:0009961Biological Processresponse to 1-aminocyclopropane-1-carboxylic acid
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 755 aa     Download sequence    Send to blast
MDLYGSSPLQ YWTSTKPGGP CTVERGRFME GGEMSGTGVE FGQVVLRKPT PSRPQSSMRG  60
GPGDMGMSLL SQGFAEHESD RSFTHMLAGA TSPPSSEDGK GGGMDSDGMN TGVRALGGGG  120
GSFAGRLLAR QKDLADMGGG MGGGGLLNQA KIMPPSRIAM PQQMPDFQQL TIPPGLSPSQ  180
LLDSPVFLAN HQAEPSPTTG TFPLPPFLAE PPKDKNNDQG STPGFVFKPF PVSAMRNPMS  240
PLSQGLGHQF GNSQQMHQTQ SQTQSGGQQM LSNVQSLGGH GQGNNNNNSN PGSSSAMPVA  300
VALSMPSPPT RQQPERSSES QQTHSPEQET QPPPQHTTYI ERPSEDGYNW RKYGQKQVKG  360
SEFPRSYYKC THATCPMKKK VERSLDGQVT EIVYKGEHNH PKPQPTRRLA VAAAQLISDN  420
ASDRADGDEK WGGFQTHGGD YGVKHERGDD PSSSVRGRPS LGFTLGQNGT PEPSSPSTSE  480
DGSKSLTEDG DDEDGPDHKR RKKDKRAVKE QLPPSAPRTI REPRVVVQTT SDVDILDDGY  540
RWRKYGQKVV KGNPHPRSYY KCTNQGCPVR KHVERASNDP KAVITTYEGK HNHDVPLARN  600
SSHDNAGAGG GNASATSQSA ASSHAGPALQ QQQGYGRRMS VFGRHLEDGS KGDSTGADVD  660
LGMGVGMGQS MRNMDGSGVG NNTVNGDMSV STSIAMNLQQ SLGQRQMMMV QPFGGGSNQH  720
DSLRPKQEQD ESHHHNGGLQ PSNVYQPQRV SLGP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-37345596877Probable WRKY transcription factor 4
2lex_A1e-37345596877Probable WRKY transcription factor 4
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1499504RRKKDK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00455DAPTransfer from AT4G26640Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024368161.11e-168WRKY transcription factor SUSIBA2-like isoform X3
TrEMBLA0A2R6XMS30.0A0A2R6XMS3_MARPO; Uncharacterized protein
STRINGPP1S135_80V6.11e-165(Physcomitrella patens)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.15e-84WRKY DNA-binding protein 4