PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0007s0033.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family MYB_related
Protein Properties Length: 794aa    MW: 88819.4 Da    PI: 8.0529
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0007s0033.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.71.7e-10735782347
                          SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
      Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 
                          +W+ eE ell+  v ++G+g+Wk+I +  +   + Rt+ ++k++w+++
  Mapoly0007s0033.1.p 735 KWSNEETELLKSEVFKYGKGRWKLILANNQtvfESRTEVDLKDKWRNL 782
                          8*********************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.9E-12728783IPR009057Homeodomain-like
PROSITE profilePS5129413.839728787IPR017930Myb domain
SuperFamilySSF466894.06E-13730783IPR009057Homeodomain-like
SMARTSM007171.9E-7732785IPR001005SANT/Myb domain
CDDcd116602.58E-14734784No hitNo description
PfamPF002493.1E-8735782IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009901Biological Processanther dehiscence
GO:0010152Biological Processpollen maturation
GO:0043067Biological Processregulation of programmed cell death
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 794 aa     Download sequence    Send to blast
MAVSNLRPLS AACSLLIGPA QGQDEADRDL KQREWIWEFF LKNNTNGSLL LELMTALPFP  60
NENLNLKRLL LLRSLSLQLS LGQFDELTLD ILKALGEMVR KPDCSLESIC FREASDEPAK  120
KRKATEKGEK HDTRISKVEA TKESVKRGLP ESLFGRKSKK SRRERTGEEG RRDANRSEEL  180
FPRGDAIGLK DGSLRTNFAY MQAGAPSWEL QLDVMIELTV KHLRGVSLSK KAFEAALAKY  240
WGDFIMDTEE PVAERLSFEI AREDIRNELW KVHSNLDLLE EITQKYTEGR VRNKLAWFLR  300
EAWADTQKTF LETVSSDVLD GTYEPLNPDV HRRNVGAVVG EDGVAVNARE LTSEKPWVRS  360
SRGRLSRSRE KLQKAFGVLE INARRELEQS GNIMDGGDNE KNTEVVKICK INDILGPPLL  420
QTRTAEVYLP SATDANNETG SKQKIYSGSE DTADAAERET EEFDHEETGR SQPCDRVLRR  480
TEDHANLVKD GGLSDKEITG DRQVRSASTS PVSPTTRGDL KSYRQDLKGK GSYSKDEASS  540
DGACNRTKCT DLQVADPQHS KMEGTAVETI NLLSPSPRPL AKIQGSLSPP PWVEARLRFR  600
RKPASPSSNN QTTGPAQVYE GNTRAGASSE AGSAKENSGP GSAEKSRKDR NMDAQHEVLL  660
QFPISKIGET AAAKPSFLQR NSTARTLEWK DEDDISESPP SPPESRRVAS ARTSAVIATR  720
RASSQTSTRR RKHRKWSNEE TELLKSEVFK YGKGRWKLIL ANNQTVFESR TEVDLKDKWR  780
NLERFEGLSV SDD*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A176VDI30.0A0A176VDI3_MARPO; Uncharacterized protein
TrEMBLA0A2R6XN910.0A0A2R6XN91_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP15031424
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49850.11e-09telomere repeat binding factor 3