PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Mapoly0003s0147.1.p

Organism

Marchantia polymorpha

Taxonomic ID

3197

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia

Family

G2-like

Protein Properties

Length: 648aa MW: 69489.2 Da PI: 5.4331

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Mapoly0003s0147.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.1	2e-33	289	343	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWtpeLHerFveav++LGG++kAtPk +l++m+vkgLt++hvkSHLQkYRl Mapoly0003s0147.1.p 289 KQRLRWTPELHERFVEAVSNLGGADKATPKGVLRVMGVKGLTIYHVKSHLQKYRL 343 79****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	13.806	286	346	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	1.9E-32	286	344	IPR009057	Homeodomain-like
SuperFamily	SSF46689	1.18E-17	287	343	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	5.0E-25	289	344	IPR006447	Myb domain, plants
Pfam	PF00249	3.9E-9	291	342	IPR001005	SANT/Myb domain
Pfam	PF14379	3.0E-24	373	419	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 648 aa Download sequence Send to blast
MHWVTRTESQ RPAGPPSDVM HRQKVQNWQP SQFNAPPIPP CGNPRFDHTV PGSSAPFIHQ 60 HYGGKQPVLG NPQSPPLLQV SAGYMVPTEA PSRQQVLHPQ PLATSNPPSH SIHSQSISLV 120 PPSSSAPHSS LYSLPPQPQS SVNPPSLHPQ QQYLDAAHSV HQAGHSKPDV DEEFNDQLQR 180 FLDSPDGASS DQMAESPCNE AFGATVEDGW PSWSEYVPDD SGIATCWTNF EPGCESGGDP 240 VVRTVYQSKD YPSLRLPEGG QASDQLQPGA LLQPPSSCGP SGNSAASAKQ RLRWTPELHE 300 RFVEAVSNLG GADKATPKGV LRVMGVKGLT IYHVKSHLQK YRLAKYIPDS VEGKTEKKRN 360 QDIIQQLDQT SGIQLTEALR LQLEVQKRLH EQLEVQRHLQ LRIEAQGKYL QKIIEDQSKF 420 GGVLSYKLVP AGLSDSDPPG TVLLSGSHLS GDIPLPTTLV TLPATEKGQE QTASEPPLKR 480 SRTDDSNLSS ETKVAMPEQV LSVTGSTEPQ LLNDNPSSTV KQAVPQVLDT DQSCNPPLLI 540 SRENDSTASP AQPDTPAQAR QQAGTAERQV LPGSPPQGIV VNPSSSQEAG QVASSTQPSI 600 TSDTGIRPVE LMPDGGSIGK SSLVEAEADL IPPISQVSPP NGTVQAE*

Sequence ? help Back to Top

Protein Sequence Length: 648 aa Download sequence Send to blast

MHWVTRTESQ RPAGPPSDVM HRQKVQNWQP SQFNAPPIPP CGNPRFDHTV PGSSAPFIHQ  60
HYGGKQPVLG NPQSPPLLQV SAGYMVPTEA PSRQQVLHPQ PLATSNPPSH SIHSQSISLV  120
PPSSSAPHSS LYSLPPQPQS SVNPPSLHPQ QQYLDAAHSV HQAGHSKPDV DEEFNDQLQR  180
FLDSPDGASS DQMAESPCNE AFGATVEDGW PSWSEYVPDD SGIATCWTNF EPGCESGGDP  240
VVRTVYQSKD YPSLRLPEGG QASDQLQPGA LLQPPSSCGP SGNSAASAKQ RLRWTPELHE  300
RFVEAVSNLG GADKATPKGV LRVMGVKGLT IYHVKSHLQK YRLAKYIPDS VEGKTEKKRN  360
QDIIQQLDQT SGIQLTEALR LQLEVQKRLH EQLEVQRHLQ LRIEAQGKYL QKIIEDQSKF  420
GGVLSYKLVP AGLSDSDPPG TVLLSGSHLS GDIPLPTTLV TLPATEKGQE QTASEPPLKR  480
SRTDDSNLSS ETKVAMPEQV LSVTGSTEPQ LLNDNPSSTV KQAVPQVLDT DQSCNPPLLI  540
SRENDSTASP AQPDTPAQAR QQAGTAERQV LPGSPPQGIV VNPSSSQEAG QVASSTQPSI  600
TSDTGIRPVE LMPDGGSIGK SSLVEAEADL IPPISQVSPP NGTVQAE*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	1e-25	288	346	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	1e-25	288	346	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	2e-25	289	346	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	2e-25	289	346	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	2e-25	289	346	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	2e-25	289	346	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	1e-25	288	346	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	1e-25	288	346	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	1e-25	288	346	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	1e-25	288	346	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	1e-25	288	346	1	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	1e-25	288	346	1	59	Protein PHOSPHATE STARVATION RESPONSE 1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A176VRK1	0.0	A0A176VRK1_MARPO; Uncharacterized protein
TrEMBL	A0A2R6XT39	0.0	A0A2R6XT39_MARPO; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP78	17	262

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	7e-69	G2-like family protein

Link Out ? help Back to Top
Phytozome	Mapoly0003s0147.1.p