PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0001s0341.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family ERF
Protein Properties Length: 306aa    MW: 33106.8 Da    PI: 8.154
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0001s0341.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.44.8e-202070256
                  AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
                         +++GVr ++ +gr++AeIrd ++    ++r++lg+f+taeeAa+a++ a+++l+g+
  Mapoly0001s0341.1.p 20 HFRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDTAEEAARAYDSAARALRGA 70
                         69*******.**********883....5*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.81E-311977No hitNo description
PROSITE profilePS5103223.1962077IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.9E-322077IPR001471AP2/ERF domain
SuperFamilySSF541714.97E-222078IPR016177DNA-binding domain
SMARTSM003802.6E-362083IPR001471AP2/ERF domain
PfamPF008473.4E-132069IPR001471AP2/ERF domain
PRINTSPR003676.4E-112132IPR001471AP2/ERF domain
PRINTSPR003676.4E-114359IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009723Biological Processresponse to ethylene
GO:0009737Biological Processresponse to abscisic acid
GO:0009864Biological Processinduced systemic resistance, jasmonic acid mediated signaling pathway
GO:0010200Biological Processresponse to chitin
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0016604Cellular Componentnuclear body
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MALRDEEQTS KAHQAEQGAH FRGVRKRPWG RFAAEIRDPW KKTRVWLGTF DTAEEAARAY  60
DSAARALRGA KAKTNFPTPC DDQSTSQSST VESWSSPKNL QRPGPADSWR SRLDLNISVN  120
EFASVEEPTT RGAMKSVSVA RSSRSPAEGI TCALSNKRPA ATLFEEVNAH SDKRQKTGKK  180
SSAGGDRRDG GAREWLGKGA AHQGIEPRAC HSDCDSSSSV ILDTETVNVP EAKPARSGPL  240
LDLNMLPPLD SSPNECEQPC GVFSNKELSL CQQQSSDNNT VDVKQTPLLF WGAPCGPTLP  300
LCSRA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-211781267ATERF1
3gcc_A2e-211781267ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00623PBMTransfer from PK19363.1Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024398578.11e-56ethylene-responsive transcription factor WRI1-like
TrEMBLA0A2R6XW750.0A0A2R6XW75_MARPO; Uncharacterized protein
STRINGPP1S127_75V6.15e-56(Physcomitrella patens)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.11e-24ERF domain protein 12