PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010112171.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 350aa    MW: 37807.8 Da    PI: 5.3836
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010112171.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.31.8e-15183228555
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     hn  E+rRR+riN+++  L+ l+P++      K +Ka++L +A+eY+k+Lq
  XP_010112171.1 183 HNLSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 228
                     9************************7.....5******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.94E-18174232No hitNo description
Gene3DG3DSA:4.10.280.104.7E-20175238IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.59E-21175244IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.803178227IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.6E-13183228IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.3E-18184233IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MDDLYGTTPS SGAGLASETE DITNFLNQLL HSSSSPYSSA SSSSCTTFKA KYAHLLHSQA  60
PPHQTTSFSD AVLFGSENRP EPECRAIDGN SGAGSSAVAD SLSGFDFSDP CGAYFGVEVK  120
EGAENNTTFS SDANTPSKGR RISPENDLGD FSCDSEGPEA SEVPSNSAPP RSSSKRSRAA  180
EIHNLSEKRR RSRINEKMKA LQNLIPNSNK TDKASMLDEA IEYLKQLQLQ VQMLSMRNGL  240
SQHPICLPGV LHPMQLPLPQ TGLTYNEGIK FLDSSRGMNT FSGREENMMH TPYNLLDPCT  300
ISNQPVIIPS VANVDSSEAS LGFEQSIQTR YGPINLPTSS KVKYHSANLS
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010112171.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010112171.20.0transcription factor SPATULA
TrEMBLW9SY870.0W9SY87_9ROSA; Transcription factor SPATULA
STRINGXP_010112171.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22763379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.11e-40bHLH family protein