PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010112091.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family AP2
Protein Properties Length: 399aa    MW: 45049.9 Da    PI: 6.1005
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010112091.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.65.4e-1277133155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV++++++gr++A+++d  s+n   k+k  + g ++ +e Aa+a++ a++k++g
  XP_010112091.1  77 SKYRGVSRHRWTGRFEAHLWDkLSWNVtqKKKGKQ-GAYDEEESAARAYDLAALKYWG 133
                     89*******************88887784446666.9*******************98 PP
2AP252.31.4e-16176227155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV +++ +grW+A+I   +   g +k+ +lg++ t eeAa+a++ a+ +++g
  XP_010112091.1 176 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 227
                     89****99**********99966...3.6*************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.4E-977133IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-1577143IPR016177DNA-binding domain
CDDcd000186.02E-1877143No hitNo description
PROSITE profilePS5103218.478141IPR001471AP2/ERF domain
SMARTSM003807.7E-1978147IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.6E-1378142IPR001471AP2/ERF domain
PRINTSPR003679.0E-67990IPR001471AP2/ERF domain
SuperFamilySSF541716.41E-18176237IPR016177DNA-binding domain
PfamPF008475.0E-12176227IPR001471AP2/ERF domain
CDDcd000184.97E-25176237No hitNo description
PROSITE profilePS5103218.953177235IPR001471AP2/ERF domain
SMARTSM003802.7E-26177241IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.3E-18177236IPR001471AP2/ERF domain
PRINTSPR003679.0E-6217237IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006110Biological Processregulation of glycolytic process
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009744Biological Processresponse to sucrose
GO:0019432Biological Processtriglyceride biosynthetic process
GO:1901959Biological Processpositive regulation of cutin biosynthetic process
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    Send to blast
MELMMQVKNE ESSTRRRQLY KADGDQAQVI KRRRRSSDQT ALTATKCDDS TFNETQQQQQ  60
VQGDYQTSPA TTVKRSSKYR GVSRHRWTGR FEAHLWDKLS WNVTQKKKGK QGAYDEEESA  120
ARAYDLAALK YWGTSTFTNF PISDYEKEIE IMQTVTKEEY LASLRRKSSG FSRGVSKYRG  180
VARHHHNGRW EARIGRVFGN KYLYLGTYST QEEAARAYDI AAIEYRGINA VTNFDLSTYI  240
RWLKPEAAGN PIGGLESEVA TEPQTVPPIT NYAPTDQDQS PFLNTGNASN FMISDNDLKY  300
LPSKPEVVFQ SKTPLLSSPG ICTKSASPTA LGLLLRSSVF RELVEKNSNV SEDETDGEEI  360
AYNQTQVGCD SDDQYDGFFF DGISDIPFVC SSNRDGIEV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11434RRRQLYKADGDQAQVIKRRRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010112091.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018859379.10.0PREDICTED: ethylene-responsive transcription factor WRI1-like isoform X2
TrEMBLW9SY210.0W9SY21_9ROSA; Ethylene-responsive transcription factor WRI1
STRINGXP_010112091.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21983283
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.37e-92AP2 family protein