PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010110694.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | AP2 | ||||||||
Protein Properties | Length: 82aa MW: 9413.86 Da PI: 10.8001 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 23.6 | 1.3e-07 | 59 | 79 | 1 | 21 |
AP2 1 sgykGVrwdkkrgrWvAeIrd 21 s+y+GV++++++grW+++I+ XP_010110694.1 59 SQYRGVTFYRRTGRWESHIWF 79 78*****************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 82 aa Download sequence Send to blast |
MKLKANNQLV YLRITSSLVD WKEVDGQEET ILPYAIAAVA APQPAAMKKC RRGPRSRSSQ 60 YRGVTFYRRT GRWESHIWFG IG |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010110694.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022944551.1 | 2e-16 | floral homeotic protein APETALA 2-like | ||||
Refseq | XP_023005912.1 | 2e-16 | floral homeotic protein APETALA 2-like | ||||
TrEMBL | W9S5W4 | 1e-54 | W9S5W4_9ROSA; AP2-like ethylene-responsive transcription factor TOE2 | ||||
STRING | XP_010110694.1 | 2e-55 | (Morus notabilis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60120.2 | 2e-17 | target of early activation tagged (EAT) 2 |
Link Out ? help Back to Top | |
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Entrez Gene | 21384533 |