PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010110018.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family TALE
Protein Properties Length: 487aa    MW: 54445 Da    PI: 5.9914
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010110018.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox308.8e-104104471954
                     HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     Fe   ++yp+ +e+  LA+++gLt++qV++WF N R +
  XP_010110018.1 410 FEHflHPYPNDSEKLMLASQTGLTKNQVSNWFINARVR 447
                     664459******************************88 PP
2BELL105.24.3e-34267338172
            BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                     e+qe q+k+akL+slleeV+ rY++y++q++ v+ +Fe++ag gsak+Yt+lAl+a+SrhF +L+dai+++i
  XP_010110018.1 267 EKQECQIKIAKLISLLEEVESRYEKYYHQMEEVMTAFEIIAGQGSAKSYTALALQAMSRHFCSLRDAIVSRI 338
                     689*****************************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005741.6E-33198336IPR006563POX domain
PfamPF075261.1E-38204335IPR006563POX domain
PROSITE profilePS5007112.001388451IPR001356Homeobox domain
SMARTSM003891.3E-9391455IPR001356Homeobox domain
CDDcd000869.71E-11391452No hitNo description
Gene3DG3DSA:1.10.10.601.2E-27396457IPR009057Homeodomain-like
SuperFamilySSF466891.2E-17397459IPR009057Homeodomain-like
PfamPF059205.6E-17408447IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 487 aa     Download sequence    Send to blast
MVSQDSPPHP DTNNILHQFL ISDSITTQNQ FENQHFDAYG SSTNFRGSNN ITFSPCPSQL  60
GVLPSIQSLG ERMSRSIDLV QAPTRVSSES EISHTRRLMD LLGAAAAAND TNHQAQRLSL  120
SLGSQMLVPH VQYRQRSLNS DLMSQNYLLS GDQEPREEAC SNPGVENVVN DEYPFPGSSL  180
ASSSASLNRH CSTLYGAASL SNAVGQSRYL KPTQSLLEEI VNIGGKAVDL SNEKYVSKLF  240
RGSRRGSLIL SSELKAEFCS SGAMSAEKQE CQIKIAKLIS LLEEVESRYE KYYHQMEEVM  300
TAFEIIAGQG SAKSYTALAL QAMSRHFCSL RDAIVSRINI EKRKLFQDLP KISAGLSQLS  360
LFDRESRNDS NYNNRITLQQ LGMMQSQRQA WRPIRGLPET SVTILRAWLF EHFLHPYPND  420
SEKLMLASQT GLTKNQVSNW FINARVRLWK PMIEEMYKEE FGDSSEESNP LGGGSMTREG  480
VTDQEED
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A6e-17397455563Homeobox protein Meis2
3k2a_B6e-17397455563Homeobox protein Meis2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010110018.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010110018.10.0BEL1-like homeodomain protein 11
SwissprotQ1PFD11e-112BLH11_ARATH; BEL1-like homeodomain protein 11
TrEMBLW9SEJ20.0W9SEJ2_9ROSA; BEL1-like homeodomain protein 11
STRINGXP_010110018.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF126452329
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75430.11e-105BEL1-like homeodomain 11