PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010109922.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | GeBP | ||||||||
Protein Properties | Length: 219aa MW: 25006.5 Da PI: 10.4776 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 41.7 | 3.2e-13 | 17 | 116 | 3 | 97 |
DUF573 3 fqrlwseeDeivlLqGlidfkaktgk..........spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqk 87 + r++se+De+ lL+ + + ++ s+ +++ + +++s+ +++s++q+++K+rrLK K++++ ++ + ++++hd XP_010109922.1 17 SPRVFSESDEVHLLKTFRKISKSSSCssfsnspsslSSLTITSQHLDLIESSLGLRFSHTQIIDKLRRLKLKYHRQART-----KSLIRTHHDLR 106 689**************9998777763444433322333346778899**************************99998.....678999***** PP DUF573 88 ifelskkiWg 97 +s++iWg XP_010109922.1 107 LHRISRSIWG 116 *********8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 1.1E-12 | 18 | 116 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence Send to blast |
MTTSNSDPPH LSSPPQSPRV FSESDEVHLL KTFRKISKSS SCSSFSNSPS SLSSLTITSQ 60 HLDLIESSLG LRFSHTQIID KLRRLKLKYH RQARTKSLIR THHDLRLHRI SRSIWGRINI 120 NSAKRHIAFH QEKGENNTDA AAVGLEDFPF LKEEFSRILP ENGVWKQGLK CLGAEKMRGF 180 NEEWMLVRKE EAELRAKRAE LEKELIHLLV PPFGSSSIS |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010109922.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015873627.1 | 1e-57 | probable transcription factor At1g61730 | ||||
TrEMBL | W9SBT1 | 1e-157 | W9SBT1_9ROSA; Uncharacterized protein | ||||
STRING | XP_010109922.1 | 1e-158 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF18296 | 3 | 3 |
Link Out ? help Back to Top | |
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Entrez Gene | 21395004 |