PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010109557.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | GeBP | ||||||||
Protein Properties | Length: 427aa MW: 47460.4 Da PI: 4.7618 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 122.7 | 1.8e-38 | 170 | 264 | 3 | 97 |
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 f r+wse+Dei++L+G+ d+kak+g++p++d+ af++f+kks++++vsksqlv+KirrLKkK+ ++ +k +++++p+fsk+h+ +f+lskkiWg XP_010109557.1 170 FARVWSEDDEIAVLKGMTDYKAKKGADPYADMGAFHDFIKKSLNADVSKSQLVDKIRRLKKKYLNNAAKGENDEDPVFSKPHELLSFKLSKKIWG 264 89********************************************************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 5.0E-34 | 170 | 264 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 427 aa Download sequence Send to blast |
MAPKRLFEKP PPADSSLEDE YESDPADNEE KNGKGNENGS AGADDEEEKS GGDEAEEDES 60 PVKKPTVSKS DDSGSGSDTE SDDTPPSPSL SGFTIKPIVS RPMDDTADKH KKKSSVRPNK 120 RATESEDPES ETSEKDSKRK KKRKVTSASA SVTASKGGGD EEDSKKSLGF ARVWSEDDEI 180 AVLKGMTDYK AKKGADPYAD MGAFHDFIKK SLNADVSKSQ LVDKIRRLKK KYLNNAAKGE 240 NDEDPVFSKP HELLSFKLSK KIWGIGANKS PNGNNVEDSD LKSRSRLKTP VPSTPVSKST 300 TTVLALPNKE MSVKKEKKKR EQVEANGKVR VEKEEEDEDE EEEEEADEEG EEEEEFWDKY 360 PHLNKSLESC FSSEFKISLP LVETSKLEKI DKKWRELQIE ELGLFVRKAH LSQEQAELVL 420 GVLKRSV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 137 | 143 | KRKKKRK |
2 | 139 | 144 | KKKRKV |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010109557.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010109557.1 | 0.0 | STOREKEEPER protein | ||||
TrEMBL | W9SD90 | 0.0 | W9SD90_9ROSA; Uncharacterized protein | ||||
STRING | XP_010109557.1 | 0.0 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13966 | 11 | 19 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61730.1 | 3e-29 | DNA-binding storekeeper protein-related transcriptional regulator |
Link Out ? help Back to Top | |
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Entrez Gene | 21401267 |