PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010109556.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | GeBP | ||||||||
Protein Properties | Length: 430aa MW: 47362.2 Da PI: 4.7016 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 122.9 | 1.6e-38 | 172 | 266 | 3 | 97 |
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 f r+wse+Dei++L+G+ d+kak+g++p++d+ af++f+kks++++vsksqlv+KirrLKkK+ ++ +k +++++p+fsk+h+ +f+lskkiWg XP_010109556.1 172 FARVWSEDDEIAVLKGMTDYKAKKGADPYADMGAFHDFIKKSLNADVSKSQLVDKIRRLKKKYLNNAAKGENDEDPVFSKPHELLSFKLSKKIWG 266 89********************************************************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 5.1E-34 | 172 | 266 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 430 aa Download sequence Send to blast |
MAPKRLLEKP PPADSSSEDK DESDSAENEE ENGKGNENGA AGADDEEEKS GGDEEVEDES 60 PVKKPTVSKP DDSGSGSDTE SDDTPPSPSL SGFTIKPIVS KPMDDTADKP KKKSSARPNK 120 RATESEDPER ETSEKDSKSK KKRKVTSAAA SASVTASNGG GDEEDSKKSS GFARVWSEDD 180 EIAVLKGMTD YKAKKGADPY ADMGAFHDFI KKSLNADVSK SQLVDKIRRL KKKYLNNAAK 240 GENDEDPVFS KPHELLSFKL SKKIWGIGAK KSPNGNNVED SDLKSRSSKK TPVPSTPVSK 300 STTTVLALPS KEMSVKKEKK KREQVEANGK VRVEKEGEDE DEDEEEEEED EEGGEEEEFW 360 DKYPHLNKSL ESCFSSEFKI CLPLVETSKL EKLDKKWREL QIEELGLFVR KAHLSQEQAE 420 LVLGVLKRSV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 139 | 144 | KKKRKV |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010109556.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010109556.1 | 0.0 | STOREKEEPER protein | ||||
TrEMBL | W9SAQ1 | 0.0 | W9SAQ1_9ROSA; Uncharacterized protein | ||||
STRING | XP_010109556.1 | 0.0 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13966 | 11 | 19 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61730.1 | 1e-29 | DNA-binding storekeeper protein-related transcriptional regulator |
Link Out ? help Back to Top | |
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Entrez Gene | 21401266 |