PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010109517.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family HD-ZIP
Protein Properties Length: 769aa    MW: 83617.6 Da    PI: 6.186
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010109517.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.31.7e-2098153156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++e+e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k
  XP_010109517.1  98 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 153
                     688999***********************************************999 PP
2START226.67.4e-712905101206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela +a++el+++a+ +ep+W++s       +n+de++++f+++ +     ++ ea+r+++vv+m++ +lve+l+d++ qW++ +     +a+ l
  XP_010109517.1 290 ELAVAAMEELIRMAQMGEPLWMTSLdgasALLNEDEYVRTFPRGIGpkpagFKCEASRETAVVIMNHINLVEILMDVN-QWSTVFSgivsRAMAL 383
                     57899********************9998899***********999********************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     ev+s+g      galq+m+ae+q++splvp R++++vRy++q+ +g+w++vdvS+d+ ++ p     vR++++pSg+li++++ng+skvtwvehv
  XP_010109517.1 384 EVLSTGvagnfnGALQVMTAEFQVPSPLVPtRESYYVRYCKQHADGTWAVVDVSLDNLRPSPA----VRCRRRPSGCLIQEMPNGYSKVTWVEHV 474
                     ************************************************************995....**************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++r +h+l+++lv+sg+a+gak+wvatl+rqce+
  XP_010109517.1 475 EVDDRGVHNLYKQLVNSGHAFGAKRWVATLDRQCER 510
                     **********************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.609.9E-2378153IPR009057Homeodomain-like
SuperFamilySSF466891.3E-1985155IPR009057Homeodomain-like
PROSITE profilePS5007116.95795155IPR001356Homeobox domain
SMARTSM003894.8E-2096159IPR001356Homeobox domain
CDDcd000862.75E-1998156No hitNo description
PfamPF000464.4E-1898153IPR001356Homeobox domain
PROSITE patternPS000270130153IPR017970Homeobox, conserved site
PROSITE profilePS5084845.725281513IPR002913START domain
SuperFamilySSF559619.89E-37283512No hitNo description
CDDcd088752.15E-131285509No hitNo description
SMARTSM002344.6E-64290510IPR002913START domain
PfamPF018521.4E-59291510IPR002913START domain
Gene3DG3DSA:3.30.530.206.0E-7386508IPR023393START-like domain
SuperFamilySSF559612.97E-25529761No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010090Biological Processtrichome morphogenesis
GO:0048497Biological Processmaintenance of floral organ identity
GO:0005634Cellular Componentnucleus
GO:0008289Molecular Functionlipid binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 769 aa     Download sequence    Send to blast
MPAGIMIPAR NMPSIVGRNG NVGGFGSTSG LTLGQPNMME AGQLHHSVLD HMTQNTSESD  60
IARNLGRDDD FDSATKSGSE NHEGASGDDQ DGQQRPKKKR YHRHTQHQIQ EMEAFFKECP  120
HPDDKQRKEL SRELGLEPLQ VKFWFQNKRT QMKTQHERHE NTQLRTENEK LRADNMRYRE  180
ALSNASCPNC GGPTAIGEMS FDEHHLRLEN ARLREEIDRI SAIAAKYVGK PVVNYPLLSS  240
PVAPRGGPLE LGVGNFGPQG GMGGEMYGAS GDLLRPISAP SEADKPMIIE LAVAAMEELI  300
RMAQMGEPLW MTSLDGASAL LNEDEYVRTF PRGIGPKPAG FKCEASRETA VVIMNHINLV  360
EILMDVNQWS TVFSGIVSRA MALEVLSTGV AGNFNGALQV MTAEFQVPSP LVPTRESYYV  420
RYCKQHADGT WAVVDVSLDN LRPSPAVRCR RRPSGCLIQE MPNGYSKVTW VEHVEVDDRG  480
VHNLYKQLVN SGHAFGAKRW VATLDRQCER LASAMATNIP NGDVGVITNQ EGRKSMLKLA  540
ERMVISFCAG VSASTTHTWT TLSGTGADDV RVMTRKRVDD PGRPPGIVLS AATSFWLPVP  600
PKRVFDFLRD ENSRSEWDIL SNGGVVQEMA HIANGRDTGN CVSLLRVNSA NSSQSNMLIL  660
QESCTDPTAS FVIYAPVDIV AMNVVLNGGD PDYVALLPSG FAILPDGSAA HGDGIGEAGS  720
GGSLLTVAFQ ILVDSVPTAK LSLGSVATVN NLIACTVERI KASLSCENA
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010109517.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010109517.10.0homeobox-leucine zipper protein HDG2 isoform X1
SwissprotQ94C370.0HDG2_ARATH; Homeobox-leucine zipper protein HDG2
TrEMBLW9SD580.0W9SD58_9ROSA; Homeobox-leucine zipper protein HDG2
STRINGXP_010109517.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15083499
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0homeodomain GLABROUS 2