PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010109496.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family TALE
Protein Properties Length: 721aa    MW: 79809.8 Da    PI: 7.8478
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010109496.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.21.5e-095696061954
                     HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     Fe   ++yp+ +++  LA+++gLt +qV++WF N R +
  XP_010109496.1 569 FEHflHPYPTDTDKHMLATQTGLTRNQVSNWFINARVR 606
                     664459******************************87 PP
2BELL104.19.4e-34421489472
            BELL   4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                     + q+kkakLl ++eeV ++Ykqy++q+q+v+ssF+ vagl sa+pY+ +Alk++SrhFrcLk aia+q+
  XP_010109496.1 421 QAQQKKAKLLYMQEEVSRKYKQYRQQMQMVVSSFQSVAGLSSATPYIFMALKTVSRHFRCLKGAIADQL 489
                     679***************************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005747.5E-35301487IPR006563POX domain
PfamPF075263.1E-38306486IPR006563POX domain
PROSITE profilePS5007111.872547610IPR001356Homeobox domain
SMARTSM003893.1E-8550614IPR001356Homeobox domain
CDDcd000861.57E-11550611No hitNo description
SuperFamilySSF466897.7E-17552616IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.3E-28553614IPR009057Homeodomain-like
PfamPF059205.9E-18567606IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 721 aa     Download sequence    Send to blast
MDQASGFRPD QSHVPQQSRR DKLRVQQLQS NPHHLHHHNF PNNLDQFSLH GHHPADHIVH  60
ARNARHANNF LYDVPSGIIP SEMLDFSSRN SASHNNVLVR NSVSDWRSPS QQLNPQYQSF  120
DWFANFAEAN NLINPTSTGH QISGQVMNLA PPYNNNDILE DPSNIVTVAS TGPRNQQDMM  180
EMSNDVRDHQ NELALLPLSY VNQSKTTPRF DNVQDHHHGL ISTTHSSTVV SDSNNLQGLS  240
LSLSSINPQF QGSEVLELPK PAIPKPSIIS KANCAGKSLQ DIVGVSSCGY RSTTGPLGPF  300
TGYATILKSS RFLWPAQQLL DDFCGSKVLM MVKSTSTCDV DNISAEMVSG EVSGSANSGD  360
HDHGDHINVN ESDQIVAKKA SNNNNNSCGS SSTFYGSNEI SGDHHGGVGS SVSFGSSRPE  420
QAQQKKAKLL YMQEEVSRKY KQYRQQMQMV VSSFQSVAGL SSATPYIFMA LKTVSRHFRC  480
LKGAIADQLK HTRKALGEDL PSPMTGSSSK LGHDHHAIST VRLKYMEQSF QKHKSGGANL  540
AFPEPQQHIW RPQRGLPERS VAILRAWLFE HFLHPYPTDT DKHMLATQTG LTRNQVSNWF  600
INARVRVWKP MVEEIHTLES KGLADQVDKS TGKHESIPAS NDQASTKLGT SVVPSKPLEC  660
PGADYSTGNR DHRLGADQQQ QQSQEKRLRL ECQGPTSMSG TLMGFIPYHR SGLEVWGHGH  720
Q
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A1e-15556614563Homeobox protein Meis2
3k2a_B1e-15556614563Homeobox protein Meis2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010109496.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010109496.10.0BEL1-like homeodomain protein 8
RefseqXP_024029949.10.0BEL1-like homeodomain protein 8
TrEMBLW9S2K10.0W9S2K1_9ROSA; BEL1-like homeodomain protein 8
STRINGXP_010109496.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF34813257
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27990.13e-61BEL1-like homeodomain 8