PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010109441.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family TALE
Protein Properties Length: 379aa    MW: 43643.5 Da    PI: 6.6315
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010109441.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox291.8e-093073412155
                     HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
        Homeobox  21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 
                     k +yps++e+  LA+++gL+++q+ +WF N+R ++
  XP_010109441.1 307 KWPYPSETEKVALAESTGLDQKQINNWFINQRKRH 341
                     669*****************************885 PP
2ELK36.88.6e-13261282122
             ELK   1 ELKhqLlrKYsgyLgsLkqEFs 22 
                     ELK++LlrKYsgyL++LkqE+s
  XP_010109441.1 261 ELKNHLLRKYSGYLSGLKQELS 282
                     9*******************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM012551.3E-18117161IPR005540KNOX1
PfamPF037902.6E-20118159IPR005540KNOX1
SMARTSM012562.2E-27168219IPR005541KNOX2
PfamPF037911.6E-22173217IPR005541KNOX2
SMARTSM011881.1E-6261282IPR005539ELK domain
PROSITE profilePS5121310.999261281IPR005539ELK domain
PfamPF037899.5E-10261282IPR005539ELK domain
PROSITE profilePS5007112.876281344IPR001356Homeobox domain
SuperFamilySSF466891.5E-19282356IPR009057Homeodomain-like
SMARTSM003891.0E-12283348IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.5E-27286347IPR009057Homeodomain-like
CDDcd000861.82E-11293345No hitNo description
PfamPF059201.4E-16301340IPR008422Homeobox KN domain
PROSITE patternPS000270319342IPR017970Homeobox, conserved site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001708Biological Processcell fate specification
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010051Biological Processxylem and phloem pattern formation
GO:0010089Biological Processxylem development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    Send to blast
MEEYNQMDEN AASRGNFLYA SQSIGGNYGR ANHDPLQINS TTTFHLHHQS SGDHCFQTTS  60
GAASIVKTEA STSHQHVVQK FHHYPSLMST RDHHHQTVHQ QPHDQTLPEN DRSKEVEAIK  120
SKIIAHPQYS NLLGAYMDCQ KVGAPPEVMA RLAASREDFE TRQRASLSSR ENSKDPELDQ  180
FMEAYYDLLV KYRDELTRPI QEAMDFMRRI ETQLNMINNG PVRIFTSDDK CEGVGSSEED  240
QDNSGGETEL PEIDPRAEDR ELKNHLLRKY SGYLSGLKQE LSKKKKKGKL PKDARQKLLS  300
WWELHYKWPY PSETEKVALA ESTGLDQKQI NNWFINQRKR HWKPSEDMQF MVMDGLHPQN  360
AALYMDGHYL GDGHYRLGP
Functional Description ? help Back to Top
Source Description
UniProtProbably binds to the DNA sequence 5'-TGAC-3'.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010109441.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010109441.10.0homeobox protein knotted-1-like 2
RefseqXP_024029913.10.0homeobox protein knotted-1-like 2
RefseqXP_024029914.10.0homeobox protein knotted-1-like 2
RefseqXP_024029915.10.0homeobox protein knotted-1-like 2
SwissprotO041350.0KNAP2_MALDO; Homeobox protein knotted-1-like 2
TrEMBLW9S2F20.0W9S2F2_9ROSA; Homeobox protein knotted-1-like 2
STRINGXP_010109441.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45843246
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08150.11e-139KNOTTED-like from Arabidopsis thaliana