PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010108525.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | GeBP | ||||||||
Protein Properties | Length: 257aa MW: 28296.7 Da PI: 6.4208 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 85.8 | 5.6e-27 | 80 | 168 | 2 | 98 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 lfqr+wse+De ++L+G+idf+ak+ ++p d+++f++f+kks+++ +sk+ l++K+rrLKk +kk + +k+h+ +f+lsk+i XP_010108525.1 80 LFQRVWSEDDETAILKGMIDFTAKRSADPAVaDMNEFHDFIKKSLQIGASKTRLSDKVRRLKKSSRKKINP---------TKPHEMAAFQLSKRI 165 69*************************88766******************************976666655.........9************** PP DUF573 96 Wgs 98 Wgs XP_010108525.1 166 WGS 168 *95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 2.3E-23 | 81 | 167 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence Send to blast |
MRPLYHEDPP ADSSSSEGEV ASSEETSGSE HEEHEMNMKS KEESPPKAKK GSHSNAENGG 60 SEEEKPEPKK SEGDDSKKVL FQRVWSEDDE TAILKGMIDF TAKRSADPAV ADMNEFHDFI 120 KKSLQIGASK TRLSDKVRRL KKSSRKKINP TKPHEMAAFQ LSKRIWGSGE PNSKGAAKSG 180 QKVKSEALSS AVALAGIEMA EIDRKAGASA SLSWPEYRVK HGLDLILESK KAEGEAKWEK 240 LCLAELDLFV EKSIDQV |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010108525.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024029327.1 | 1e-146 | probable transcription factor At4g00390 | ||||
TrEMBL | W9RZW6 | 0.0 | W9RZW6_9ROSA; Uncharacterized protein | ||||
STRING | XP_010108525.1 | 0.0 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1831 | 34 | 90 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61730.1 | 7e-14 | DNA-binding storekeeper protein-related transcriptional regulator |
Link Out ? help Back to Top | |
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Entrez Gene | 21402316 |