PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010108514.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | GeBP | ||||||||
Protein Properties | Length: 182aa MW: 20173.2 Da PI: 10.6217 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 56.4 | 8.5e-18 | 1 | 59 | 34 | 97 |
DUF573 34 idafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 +++f++f+kks++++v+k ql++K+rrLKkK+ ++ ++ k+ + +k+h+q++felsk iWg XP_010108514.1 1 MNGFHDFIKKSLHVEVTKAQLSNKVRRLKKKYSNNAAR----KKYNPTKPHEQNVFELSK-IWG 59 799***********************************....788899**********96.786 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 2.8E-16 | 1 | 59 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence Send to blast |
MNGFHDFIKK SLHVEVTKAQ LSNKVRRLKK KYSNNAARKK YNPTKPHEQN VFELSKIWGG 60 GGSRASVSSP KSNGAAKSNG KATLASPAAP KEGSRKSEIG GKSSVSVRSS EMIRFGMRSL 120 PDESLDLVVM KGLDLLPDAK KAELDAMWKK LHIDELELFV EKNQLMNEQV KLVLEKLKSS 180 DH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 26 | 39 | RLKKKYSNNAARKK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010108514.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010108513.2 | 1e-127 | probable transcription factor At1g11510 | ||||
TrEMBL | W9RZS3 | 1e-128 | W9RZS3_9ROSA; Uncharacterized protein | ||||
STRING | XP_010108514.1 | 1e-129 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1831 | 34 | 90 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61730.1 | 2e-14 | DNA-binding storekeeper protein-related transcriptional regulator |
Link Out ? help Back to Top | |
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Entrez Gene | 21402305 |