PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010108512.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family GeBP
Protein Properties Length: 367aa    MW: 39839.5 Da    PI: 6.828
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010108512.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573103.12.3e-32159248197
          DUF573   1 klfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 
                     klfqrlwseeDeiv+L+Glid++ak g +       f++f+kks++++v+k q+++K+r+LKkK+ ++ ++    k+ + +k+h+q++felskki
  XP_010108512.1 159 KLFQRLWSEEDEIVILKGLIDYAAKGGGD---PAATFHDFIKKSLHVEVTKAQFSDKVRKLKKKYSNNAAR----KKYNPTKPHEQNVFELSKKI 246
                     579*******************9999955...5789***********************************....788899************** PP

          DUF573  96 Wg 97 
                     Wg
  XP_010108512.1 247 WG 248
                     *8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.5E-30161248IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MAPRRASPLD VPPAVSSSDE EEETSSEEGE TSEDEQVQAT PKPTVLSPNT KKTDDDSESD  60
AESSSESEPA DSTVKPIASK PMEEKTGARS KPSVAATPEK ESAAKRPRES ETTAKDSKKR  120
VKKKSGPEVP PHEADGDGGA ASDEEQEESK KSGGDDSKKL FQRLWSEEDE IVILKGLIDY  180
AAKGGGDPAA TFHDFIKKSL HVEVTKAQFS DKVRKLKKKY SNNAARKKYN PTKPHEQNVF  240
ELSKKIWGGG GSRAGVSSPK SNGAAKSNGK ATLASPAAPK EGSRKSEIGG KSSVSVRSIE  300
MIRFGMRSLP EEVVMKGLDL LPDAKKAELD AMWKKLHIDE LELFVEKNQL MNEQVKLVLQ  360
KLRSSDH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1214227KLKKKYSNNAARKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010108512.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024029337.10.0probable transcription factor At1g61730
RefseqXP_024029338.10.0probable transcription factor At1g61730
RefseqXP_024029339.10.0probable transcription factor At1g61730
RefseqXP_024029340.10.0probable transcription factor At1g61730
RefseqXP_024029341.10.0probable transcription factor At1g61730
TrEMBLW9S7U10.0W9S7U1_9ROSA; Uncharacterized protein
STRINGXP_010108512.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18313490
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.12e-28DNA-binding storekeeper protein-related transcriptional regulator