PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010108509.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family GeBP
Protein Properties Length: 371aa    MW: 40392.3 Da    PI: 8.6674
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010108509.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573116.51.6e-36159252197
          DUF573   1 klfqrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 
                     klfqrlwseeDeiv+L+Glid++ak+g +p + d++ f++f+kks++++v+ksql++K+r+LKkK+ ++ ++    k+ + +k+h+q++felskk
  XP_010108509.1 159 KLFQRLWSEEDEIVILKGLIDYAAKRGGDPAAtDMNTFHDFIKKSLHVEVTKSQLSNKVRKLKKKYLNNAAR----KKYNPTKPHEQNAFELSKK 249
                     579*************************99888***************************************....788899************* PP

          DUF573  95 iWg 97 
                     iWg
  XP_010108509.1 250 IWG 252
                     **8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045043.2E-33161252IPR007592Protein of unknown function DUF573
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005730Cellular Componentnucleolus
GO:0005829Cellular Componentcytosol
GO:0009507Cellular Componentchloroplast
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MAPRRASPLD VPPAVSSSDE EEETSSEEEE TSEDEKVQAT PKPTVLSPNT KKTDDDSESD  60
AESSSESEPA DSTVKPIASK PMEEKKGARS KPSVAATPEI KSAAKRPRES ETTAKDSKKR  120
VKKKSGPEVP PPEADGDGGV ASDEEQEESK KSGGDDSKKL FQRLWSEEDE IVILKGLIDY  180
AAKRGGDPAA TDMNTFHDFI KKSLHVEVTK SQLSNKVRKL KKKYLNNAAR KKYNPTKPHE  240
QNAFELSKKI WGGRGSRAGV SSPKSNGAAK SNGKATLASP APPKEGSRKS EIGGKSGVSV  300
RSSEMIGFGM KSLPEEVVKK GLDLLPESKK AELDAMWKKL HIDELELFVE KNQLMNEQVK  360
LVLEKLKSSD H
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1218231KLKKKYLNNAARKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010108509.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010108509.10.0probable transcription factor At1g61730
TrEMBLW9RZS00.0W9RZS0_9ROSA; Uncharacterized protein
STRINGXP_010108509.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18313490
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.11e-33DNA-binding storekeeper protein-related transcriptional regulator