PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010107411.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 770aa MW: 84626.7 Da PI: 6.3548 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 68.3 | 9.7e-22 | 69 | 124 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++k +++t++q++eLe++F+++++p++++r eL+k+lgL+++qVk+WFqNrR+++k XP_010107411.1 69 KKKYHRHTPNQIQELEAFFKECPHPDEKQRLELSKRLGLETKQVKFWFQNRRTQMK 124 79999************************************************999 PP | |||||||
2 | START | 195.6 | 2.3e-61 | 281 | 504 | 2 | 206 |
HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEE CS START 2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetle 83 la++a++e++k+a+a+ p+W ks e +n++e++++f++ + + +ea r+s vv+ ++ lve+l+d + +W+e+++ +a+t+e XP_010107411.1 281 LALAAMDEFIKMAQANGPLWIKSTnggkETLNYEEYMRTFPSCIGpkpsnYVSEATRDSSVVIINSLALVETLMDAN-RWTEMFPclvaRASTIE 374 6899************************************998889***9***************************.***************** PP EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE CS START 84 vissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvd 171 is+g galq+++aelq+lsplvp R f+R+++q+ +g+w++vdvSvd +++ ++ s+ +++lpSg+l++++++g+skvtw+eh + XP_010107411.1 375 MISTGiggtrnGALQVINAELQVLSPLVPlRPLKFLRFCKQHADGVWAVVDVSVDINRDATNANSYFHCRRLPSGCLVQDMPDGYSKVTWIEHSE 469 *********************************************************************************************** PP --SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 172 lkgrlphwllrslvksglaegaktwvatlqrqcek 206 ++++ +h+++rs + g+ +ga++w+atlqrqce+ XP_010107411.1 470 YDDSGVHQMFRSYLICGMGFGAQRWLATLQRQCEC 504 *********************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 4.8E-23 | 54 | 120 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 5.43E-21 | 55 | 126 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50071 | 18.042 | 66 | 126 | IPR001356 | Homeobox domain |
SMART | SM00389 | 4.5E-20 | 68 | 130 | IPR001356 | Homeobox domain |
Pfam | PF00046 | 2.5E-19 | 69 | 124 | IPR001356 | Homeobox domain |
CDD | cd00086 | 2.21E-20 | 69 | 126 | No hit | No description |
PROSITE pattern | PS00027 | 0 | 101 | 124 | IPR017970 | Homeobox, conserved site |
PROSITE profile | PS50848 | 41.437 | 271 | 507 | IPR002913 | START domain |
SuperFamily | SSF55961 | 6.46E-31 | 272 | 504 | No hit | No description |
CDD | cd08875 | 1.52E-118 | 275 | 503 | No hit | No description |
SMART | SM00234 | 4.0E-46 | 280 | 504 | IPR002913 | START domain |
Pfam | PF01852 | 8.1E-53 | 281 | 504 | IPR002913 | START domain |
SuperFamily | SSF55961 | 2.2E-19 | 524 | 742 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0008289 | Molecular Function | lipid binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 770 aa Download sequence Send to blast |
MQFSVLAESG SRWRNMDSHG EMGLLGENFD LGIIGRMRDD GYESRSGSDN LEGASGDDQD 60 AGDDQPRKKK KYHRHTPNQI QELEAFFKEC PHPDEKQRLE LSKRLGLETK QVKFWFQNRR 120 TQMKTQLERH ENIILRQEND KLQAENNMMK DAMATPMCNQ CGGPAIPGQI SFEEHQLRIE 180 NARLKDELNR ICALANKFLG RPLSSLATPI PLPSSTSSLE LAVGRNGMGG LNVVGAPLPM 240 GLELGDGISS AGPMIPMMKH TMGMNVMGTE IPFERSMLID LALAAMDEFI KMAQANGPLW 300 IKSTNGGKET LNYEEYMRTF PSCIGPKPSN YVSEATRDSS VVIINSLALV ETLMDANRWT 360 EMFPCLVARA STIEMISTGI GGTRNGALQV INAELQVLSP LVPLRPLKFL RFCKQHADGV 420 WAVVDVSVDI NRDATNANSY FHCRRLPSGC LVQDMPDGYS KVTWIEHSEY DDSGVHQMFR 480 SYLICGMGFG AQRWLATLQR QCECLAILTS PSISNENQLA MSPSGKRSML KLAQRMVDNF 540 CAGVTASTVR KWDKLCVGTV GEDVRVMTRK SMDDPGEPPG IILSAATSVW IPVSQKRLFE 600 FLRDERFRSD WDILSNGGPM QEMVHITKCQ RHGNHVSLLR ASTIGTNDSS MLILQETWND 660 ASGSMVVYAP VDRASINVVM HGGDSAYVAL LPSGFAILPD GSSQPNYCSG PSVKGEASNG 720 EGGGGGCLLS VGFQILVNSL PTAKLTVESV ETVNNLISCT IQKIKAALNV |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in the regulation of the tissue-specific accumulation of anthocyanins and in cellular organization of the primary root. {ECO:0000269|PubMed:10402424}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010107411.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010107411.1 | 0.0 | homeobox-leucine zipper protein ANTHOCYANINLESS 2 isoform X1 | ||||
Swissprot | Q0WV12 | 0.0 | ANL2_ARATH; Homeobox-leucine zipper protein ANTHOCYANINLESS 2 | ||||
TrEMBL | W9RWW9 | 0.0 | W9RWW9_9ROSA; Homeobox-leucine zipper protein ANTHOCYANINLESS 2 | ||||
STRING | XP_010107411.1 | 0.0 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1192 | 34 | 106 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00730.1 | 0.0 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Entrez Gene | 21398834 |
Publications ? help Back to Top | |||
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