PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010107393.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ARR-B
Protein Properties Length: 764aa    MW: 81367.5 Da    PI: 5.7921
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010107393.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like78.39.7e-25249302155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     +p+++Wt+ LH+rF+ av++L   +kA+Pk+ile+m+v+gLt+e+v+SHLQkYRl
  XP_010107393.1 249 RPKVVWTNSLHNRFLLAVQHL-SFDKAVPKRILEFMNVPGLTRENVASHLQKYRL 302
                     589******************.9*******************************7 PP
2Response_reg76.21.2e-25261341109
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     +l+vdD+ + + ++ ++l+   y +v++a+++ +al++l+ +   +Dl+++D  mp m+G+el k+  +e  klp+i++ta ++e+ +l+ l+ G
  XP_010107393.1  26 ILVVDDDSTTLAIVSSILQIFSY-KVETAKNPLDALATLRMQSgyFDLVVTDFHMPYMNGFELKKQVDKEF-KLPVILMTADDQENVMLQSLESG 118
                     89*********************.***************888888**********************9988.9********************** PP

                     ESEEEESS--HHHHHH CS
    Response_reg  94 akdflsKpfdpeelvk 109
                     +  f+ Kp++p +l +
  XP_010107393.1 119 IALFIPKPVNPTDLKD 134
                     ************9976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23002.8E-3224175No hitNo description
SMARTSM004482.6E-2424136IPR001789Signal transduction response regulator, receiver domain
SuperFamilySSF521721.17E-2924142IPR011006CheY-like superfamily
PROSITE profilePS5011037.0925140IPR001789Signal transduction response regulator, receiver domain
PfamPF000724.8E-2226134IPR001789Signal transduction response regulator, receiver domain
CDDcd001568.22E-2427139No hitNo description
PROSITE profilePS512949.79246305IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.5E-25247306IPR009057Homeodomain-like
SuperFamilySSF466891.76E-18247306IPR009057Homeodomain-like
TIGRFAMsTIGR015572.0E-24250303IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 764 aa     Download sequence    Send to blast
MDSARVMSGI GQSSDAQVRP SIDIRILVVD DDSTTLAIVS SILQIFSYKV ETAKNPLDAL  60
ATLRMQSGYF DLVVTDFHMP YMNGFELKKQ VDKEFKLPVI LMTADDQENV MLQSLESGIA  120
LFIPKPVNPT DLKDLWQYAV RTQKGKSVVI EEIGSNPIIP PAFDDDDDLQ GHQSPSGPGS  180
SCSSGNAGSS ATAGALIPRN QPGNKRGGRS PPPNDNGKNK GSTSTKKSCC RPENRPAGTT  240
PGRGRRPRRP KVVWTNSLHN RFLLAVQHLS FDKAVPKRIL EFMNVPGLTR ENVASHLQKY  300
RLFLKKVAEN GTSGASRMLA DRILLRSSFA SGYPIQMMLQ TAQQLYPQLS RPSQQSLFPP  360
PPPPAQQSQS QSQSQPNNGN NIPSSAGPVG ISTLLTNHQP APANVVQQPL LGAANVNAAA  420
TSGNVVASTG GPNTSYAFVN HGGNNGFSVG VNPMQAWQQQ NQARVGPFAG TTYPSNNNST  480
PGTVGNNVAP ANNYVAPNNS SGIHMIGGNM AGHNQLPASV GVPNGINGTG GRRLIGMRNG  540
PGPSGNIMNG VPVGNMGSGN VGYGQAGGAG AASGGFQGAN NPPAAPQAPQ VLPNIDHRQQ  600
NVDNGSLPPP PPPPRPQYRL ANLGRENQNN NDNNNADNEL GDVVDNNDPA FGSGGVFLNL  660
DNLPPPNYQA LIEDIPSDLS DISFEEDNDH QVNTPTNQVQ NPDPLAAGPS VVQENAPNLE  720
QSLGLQQPRM IDDLTDPFQL MHIANMQQRD VDWDEFMDAM MEDD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A1e-21248308464ARR10-B
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010107393.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010107393.10.0two-component response regulator ARR2
TrEMBLW9S4R90.0W9S4R9_9ROSA; Putative two-component response regulator
STRINGXP_010107393.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF101422534
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.13e-26response regulator 1