PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010106984.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family NF-YA
Protein Properties Length: 340aa    MW: 37523.3 Da    PI: 9.172
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010106984.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA91.31.2e-28162218258
       CBFB_NFYA   2 eplYVNaKQyqrIlkRRqkRaklee.ekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                      p+YVNaKQy++I++RRq+Rak++   +k+ ++ rk y+heSRh hA+rRpRg+gGrF
  XP_010106984.1 162 GPIYVNAKQYHGIIRRRQSRAKAAVlLNKI-QRPRKSYMHESRHLHAMRRPRGCGGRF 218
                     69*********************9956777.**************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005214.9E-32159221IPR001289Nuclear transcription factor Y subunit A
PROSITE profilePS5115235.417160221IPR001289Nuclear transcription factor Y subunit A
PfamPF020456.6E-25163218IPR001289Nuclear transcription factor Y subunit A
PRINTSPR006161.4E-22163185IPR001289Nuclear transcription factor Y subunit A
PRINTSPR006161.4E-22195218IPR001289Nuclear transcription factor Y subunit A
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009567Biological Processdouble fertilization forming a zygote and endosperm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MAMQTMYFKE HEGLIPNTIG QFSSIPTGHW WGTAFGSQSV HGDSCAQQLK PLSMEQPGGG  60
DQFMAAKQAV RGTDLGPDKG NTTQFTIFHG DCKFSGDGQK SQATISLQTS PPEYHARFEL  120
GFSQPMVCAK YPYIDQYCGV ISYGQQISGR IMLPLNLTAD EGPIYVNAKQ YHGIIRRRQS  180
RAKAAVLLNK IQRPRKSYMH ESRHLHAMRR PRGCGGRFLN TKNLNNNNKE GSPEAKKLGS  240
EQLFSQPSSR SPSSVLESES GTLNSSKEAN NSSGPNIPGS EVTSMYTRGD LDHFQMSHRH  300
HHHLGVASLH PLTGMLELDV MPTKWNIAAA DHHGCCNIKV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4g91_A4e-16161221262HAPB protein
4g92_A4e-16161221262HAPB protein
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010106984.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010106984.10.0nuclear transcription factor Y subunit A-10
TrEMBLW9SK300.0W9SK30_9ROSA; Nuclear transcription factor Y subunit A-10
STRINGXP_010106984.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37943464
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.29e-53nuclear factor Y, subunit A10