PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010106738.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | STAT | ||||||||
Protein Properties | Length: 770aa MW: 87295.5 Da PI: 5.6966 | ||||||||
Description | STAT family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | STAT | 180 | 3.3e-56 | 272 | 393 | 1 | 122 |
STAT 1 ldvvllnalgqpvekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkky 95 ldvv++++ g+p++ ++evvasL+y d+g++ve+++d eapLL+sydG+ef+s++rp+kll+GrasfklkisqLsskc nrLfrikf++pk+++y XP_010106738.1 272 LDVVFIDTSGHPIREEMEVVASLVYLDNGAPVERTSDGEAPLLASYDGLEFTSYERPSKLLHGRASFKLKISQLSSKCQNRLFRIKFHLPKMETY 366 8********************************************************************************************** PP STAT 96 pfleavskpirCisrsrntrsssltkk 122 pf+ea+s pir isr+rntr ss+++k XP_010106738.1 367 PFFEAFSPPIRSISRNRNTRLSSVVWK 393 **********************99987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd10338 | 4.59E-57 | 652 | 761 | No hit | No description |
Gene3D | G3DSA:3.30.505.10 | 4.6E-8 | 655 | 745 | IPR000980 | SH2 domain |
SuperFamily | SSF55550 | 1.66E-8 | 659 | 746 | IPR000980 | SH2 domain |
PROSITE profile | PS50001 | 10.716 | 663 | 770 | IPR000980 | SH2 domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 770 aa Download sequence Send to blast |
MADEVALERE NYSLLKNLRV EIEGEKEKTF SLCFWLYLVN STTLPLSILQ KVHPDVTGNS 60 PFLVIHEKKV KLFPLLPSRK EDPESEVPHA SVEVEFEFSQ EKWVHFGCEC FNDAGTFSMV 120 IAGRGIYKNH SFSIHVNVNR RVDLVHLHLI SKLLGLLWIV VEDVSTDFLR LHIDGEIVGE 180 KSLSSALETD SNFNGFVKLT LVGGAGDDSR DQGYIYNLKT FATTSSIKDH CAKDPPVQLS 240 IDKSSASEIE EGDGGVWSIV GGKASCRRNF SLDVVFIDTS GHPIREEMEV VASLVYLDNG 300 APVERTSDGE APLLASYDGL EFTSYERPSK LLHGRASFKL KISQLSSKCQ NRLFRIKFHL 360 PKMETYPFFE AFSPPIRSIS RNRNTRLSSV VWKRCTSALH PISQSSEMDE DMLEVRQNSL 420 HETKPNPSSK RLRLGQDRIS TNFRADPPLE APDEECNSHA WTANKVENEF MKSSTMEHEN 480 LEEDNSSSGS ESIEARNSAP KGSSSTRNQI SDLTVFKYSL ANLSERSLLL KEIANSASNE 540 EILNFAHQVS LYSGCSHHRN QIIMAKRLVE EGTKAWNLIS QNTNKVQWES MVFDIEGQFM 600 KISRCSSRSL TQQDFDLLRR ICGCQEYVAQ ENFEQMWCWL YPIAYALSRD WINAMWSSTS 660 PRWIEGFITK EEAESSLQGP RGLQEPGTFV LRFPTSRIWP HPDAGSLVVT YVGSDYAIHH 720 KLLSLDHVYS SAENEKDVKP LQDMLLEEPE LSRLGRQDYL ITLFNLFSRL |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010106738.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024028241.1 | 0.0 | SH2 domain-containing protein A | ||||
TrEMBL | W9S5N4 | 0.0 | W9S5N4_9ROSA; Uncharacterized protein | ||||
STRING | XP_010106738.1 | 0.0 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF6710 | 30 | 36 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78540.2 | 0.0 | SH2 domain protein B |
Link Out ? help Back to Top | |
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Entrez Gene | 21403641 |