PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010106034.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | NAC | ||||||||
Protein Properties | Length: 490aa MW: 55188.5 Da PI: 5.4228 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 52.9 | 1.2e-16 | 17 | 117 | 10 | 128 |
NAM 10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkk 104 +d+++v L ++g++l+ +vi++v+ y+++P+ Lp v w+f s++ +k ++ gyW+++g+ +++s +++ +g + XP_010106034.1 17 SDKDIV-TSLDGIISGSPLPS-NVISDVNPYQYKPSALP--V----GIWFFISSKMRKD---------ADFGYWRTKGEACRIFS-NSSITGWRS 93 678888.55999999999999.99**************9..3....2477776665554.........578**************.999****** PP NAM 105 tLvfykgrapkgektdWvmheyrl 128 tL fy+g+ap+ +ktdWvm+ey + XP_010106034.1 94 TLEFYEGQAPHWHKTDWVMQEYWI 117 **********************75 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 21.919 | 8 | 140 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 9.55E-22 | 17 | 139 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.2E-8 | 32 | 115 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 490 aa Download sequence Send to blast |
MCPPAASPAS DIDLYCSDKD IVTSLDGIIS GSPLPSNVIS DVNPYQYKPS ALPVGIWFFI 60 SSKMRKDADF GYWRTKGEAC RIFSNSSITG WRSTLEFYEG QAPHWHKTDW VMQEYWITRK 120 ILSKDFNEKE NSLLCNVFFV GEQNPNPEKT WKMAEVDTAS QSTPVVVQKT ENHTGQGSTS 180 KRQINEGDGL PFIAVCEDND TEIVRTRERV SHNLVDIEHE TDYLPGGDFL ELLDLENPAS 240 PSSSSDSSCL TMSSDECFDA LDLLRDLESE KSHAQMQNNP DCKLSVFASS MPTEMVMYPA 300 STGTLDKPPN EEFLRSNRSI PGSASSIKIT DKKVLMNPDG KQKPDFRNEG APSTSRSGVV 360 SLSGDMAAPE EDRKAARGRM KKLKKKLFNL FFSFWFFEIQ FLVKIRTIWY QSSWWRFGIG 420 LSKFEIEKFT GKNDFALWRL KIRALLVQQG LEVALSGEKN LPTTLSEKEK KDLLDKAHSV 480 LILSLGDKVL |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010106034.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KF030986 | 5e-52 | KF030986.1 Morus indica microsatellite MSCP237-C sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024027738.1 | 0.0 | NAC domain-containing protein 7 | ||||
Refseq | XP_024027739.1 | 0.0 | NAC domain-containing protein 7 | ||||
TrEMBL | W9S3M1 | 0.0 | W9S3M1_9ROSA; NAC domain-containing protein 78 | ||||
STRING | XP_010106034.1 | 0.0 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF10588 | 22 | 35 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65910.1 | 5e-13 | NAC domain containing protein 28 |
Link Out ? help Back to Top | |
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Entrez Gene | 21404074 |