PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010105162.1

Organism

Morus notabilis

Taxonomic ID

981085

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Family

BES1

Protein Properties

Length: 522aa MW: 59383.2 Da PI: 5.4669

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010105162.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	145.7	4.1e-45	64	201	1	134
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 gg+++++++kE+E++k+RER+RRai+++++aGLR++Gn++lp+raD+n+Vl+AL+r+AGw+v++DGttyr + + + + +a + ++ +++ss XP_010105162.1 64 GGKREREREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALARQAGWLVDPDGTTYRPQHHGH-HGDASYNNNNCQQSSSRD 157 578999**************************************************************333333.455555555566666655 PP DUF822 96 .sslkssalaspvesysaspksssfpspssldsislasa....a 134 ++ + p++ ++ + s ++sp+slds+ +a + XP_010105162.1 158 sLVDVDVDSLLPIHDNTNTNTLSMSMSPTSLDSVVIAPPpdtaD 201 3444555556678888888889999*******9986554431 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	7.1E-43	65	195	IPR008540	BES1/BZR1 plant transcription factor, N-terminal
Gene3D	G3DSA:3.20.20.80	1.0E-123	225	511	IPR013781	Glycoside hydrolase, catalytic domain
SuperFamily	SSF51445	1.9E-107	226	507	IPR017853	Glycoside hydrolase superfamily
Pfam	PF01373	5.5E-60	248	506	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	9.9E-30	263	277	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	9.9E-30	284	302	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	9.9E-30	306	327	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	9.9E-30	399	421	IPR001554	Glycoside hydrolase, family 14
PRINTS	PR00750	9.9E-30	472	491	IPR001554	Glycoside hydrolase, family 14

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0000272	Biological Process	polysaccharide catabolic process
GO:0016161	Molecular Function	beta-amylase activity

Sequence ? help Back to Top
Protein Sequence Length: 522 aa Download sequence Send to blast
MNEKENKMMN EEDQSDPPEV FPHSIQTPTQ PQGRRPRGFA ATHQLGPNTT TTGGHSPSDN 60 PSKGGKRERE REKEKERTKL RERHRRAITS RMLAGLRQYG NFPLPARADM NDVLAALARQ 120 AGWLVDPDGT TYRPQHHGHH GDASYNNNNC QQSSSRDSLV DVDVDSLLPI HDNTNTNTLS 180 MSMSPTSLDS VVIAPPPDTA DTTASIHSPQ TQNQLMQQED FPSVATPYVP VYVKISSVII 240 NNFCQLVDPE SVQQELTDLQ SLNVDGVVVQ CWWGIVESWT PQKYIWSGYR HLFNIVRHFK 300 LKLQVVMAFH EYAASESGET LITLPQWVLE IGKENPDIFF TDREGRRNTE CLSWGIDKER 360 VLQGRTGIEV YFDLMRSFRT EFDDLFAEGI ICAVEIGLGP SGELKYPSFS ERMGWKYPGI 420 GEFQCYDKYL EQSLRKAAKL RGHSFWARGP DNAGEYNSRP HETGFFCERG DYDSYYGRFF 480 LHWYAQSLID HADNVLSLAN LAFEETEMVV KVIYAENDKQ IS

Sequence ? help Back to Top

Protein Sequence Length: 522 aa Download sequence Send to blast

MNEKENKMMN EEDQSDPPEV FPHSIQTPTQ PQGRRPRGFA ATHQLGPNTT TTGGHSPSDN  60
PSKGGKRERE REKEKERTKL RERHRRAITS RMLAGLRQYG NFPLPARADM NDVLAALARQ  120
AGWLVDPDGT TYRPQHHGHH GDASYNNNNC QQSSSRDSLV DVDVDSLLPI HDNTNTNTLS  180
MSMSPTSLDS VVIAPPPDTA DTTASIHSPQ TQNQLMQQED FPSVATPYVP VYVKISSVII  240
NNFCQLVDPE SVQQELTDLQ SLNVDGVVVQ CWWGIVESWT PQKYIWSGYR HLFNIVRHFK  300
LKLQVVMAFH EYAASESGET LITLPQWVLE IGKENPDIFF TDREGRRNTE CLSWGIDKER  360
VLQGRTGIEV YFDLMRSFRT EFDDLFAEGI ICAVEIGLGP SGELKYPSFS ERMGWKYPGI  420
GEFQCYDKYL EQSLRKAAKL RGHSFWARGP DNAGEYNSRP HETGFFCERG DYDSYYGRFF  480
LHWYAQSLID HADNVLSLAN LAFEETEMVV KVIYAENDKQ IS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1q6g_A	2e-87	228	512	11	296	beta-amylase
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010105162.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024027069.1	0.0	beta-amylase 8 isoform X1
Refseq	XP_024027070.1	0.0	beta-amylase 8 isoform X1
Swissprot	Q9FH80	0.0	BAM8_ARATH; Beta-amylase 8
TrEMBL	W9RQK4	0.0	W9RQK4_9ROSA; Beta-amylase
STRING	XP_010105162.1	0.0	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF11902	30	32

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45300.1	0.0	beta-amylase 2

Link Out ? help Back to Top
Entrez Gene	21386208

Publications ? help Back to Top
Soyk S, et al. The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation. Plant Cell, 2014. 26(4): p. 1746-1763 [PMID:24748042]