PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010105053.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family CPP
Protein Properties Length: 598aa    MW: 63554.4 Da    PI: 7.4736
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010105053.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR43.66.1e-14119158242
             TCR   2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 
                     ++k+CnC++s+Clk+YCeCfa+g +C+  C+C +C N+ e+
  XP_010105053.1 119 KQKQCNCRHSRCLKLYCECFASGIYCDG-CNCINCYNNVEN 158
                     89**************************.********9875 PP
2TCR50.93.1e-16203242140
             TCR   1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 
                     k++kgC+Ckks ClkkYCeCf+a+  Cse+CkC dCkN e
  XP_010105053.1 203 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFE 242
                     589***********************************65 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011142.8E-16118158IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163436.797119243IPR005172CRC domain
PfamPF036385.0E-11120155IPR005172CRC domain
SMARTSM011148.4E-20203244IPR033467Tesmin/TSO1-like CXC domain
PfamPF036381.2E-12206241IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 598 aa     Download sequence    Send to blast
MGEGEGGDLP PKKIQSDAVA ATADVPAKKL VRQLDFTGYG GASGSVVLPE HPQSQPVLPA  60
QPVTAPPLQS EMQSQPQPPE VAMPVATQTS SIPSARMVKP ESPKARSRSS EAKDGTPKKQ  120
KQCNCRHSRC LKLYCECFAS GIYCDGCNCI NCYNNVENEA ARREAVEATL ERNPNAFRPK  180
IASSPHGTRD SREDSGEVMI LGKHNKGCHC KKSGCLKKYC ECFQANILCS ENCKCMDCKN  240
FEGSEERQAL FHGDHGNNIA YIQQAANAAI TGAIGSSGYA SPPVSKKRKG QELFFGPTPK  300
DTTVHGVGQF QQANHHRAPA PSPSVPVARL GSTAGLGPSK FTYRSLLADI IQPQDLKELC  360
SVLVVLSGEA AKTLADQRSA TEKRVEDQSE TSLASATQDR LQNQKESDLE KAVADDCSSG  420
IQANKTGTDD SGSGDADLPK GRPMSPDTLA LMCDEQDTMF MAAASPSGTG HSCSISSQHG  480
MTEVYAEQER IVLSKFRDCL KMLIALGEIK GKLQTKCSSL ARSEAGTQKD PLSNGSTNPK  540
TEANNQQIPA SNGVSKTIVT PTTKTTLSVP AAAPATASAD LLPKIPSFPE NGDSKPKD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5fd3_A1e-311112522132Protein lin-54 homolog
5fd3_B1e-311112522132Protein lin-54 homolog
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPlays a role in development of both male and female reproductive tissues. {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00045PBMTransfer from AT4G29000Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010105053.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024026990.10.0protein tesmin/TSO1-like CXC 5
SwissprotQ9SZD10.0TCX5_ARATH; Protein tesmin/TSO1-like CXC 5
TrEMBLW9RQG80.0W9RQG8_9ROSA; Uncharacterized protein
STRINGXP_010105053.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26263379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29000.11e-173Tesmin/TSO1-like CXC domain-containing protein