PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_010105000.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 382aa MW: 42027.6 Da PI: 7.1688 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 55.7 | 1e-17 | 241 | 303 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e++lkrerrkq NRe+A++sR+RK+ae eeL ++ ++L aeN aLk ele+lk + kl+ e+ XP_010105000.1 241 ERQLKRERRKQANRESAKKSRLRKQAEYEELLTRWESLNAENAALKCELEQLKGDSGKLRHEN 303 799***************************************************999999887 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.4E-12 | 240 | 301 | No hit | No description |
SMART | SM00338 | 7.4E-12 | 241 | 305 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.4E-16 | 241 | 303 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.806 | 243 | 306 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.06E-9 | 244 | 299 | No hit | No description |
CDD | cd14702 | 8.59E-14 | 246 | 292 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 248 | 263 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 382 aa Download sequence Send to blast |
MKFRHVANVQ QLSGTDDLGQ SGYHSSTTFT CAFDTIHFRE NTYRAPPHAP ARAPPILPPP 60 SPPSLYSILA PSEITPNQRF SLQFPRKRKQ TLENSSQALK SFKSLEQMEQ GLAKKLKGSD 120 GLPIQVGCDN PQSDVSQSLE RDVDGMTDGS NGSSDADKFQ MNNGAESKQS SDIDVKAYTQ 180 VNSSIEEKVN ETSTDLSDNT MLPVFIGYVG SQCEKAGNTP TCATSSGIGF PSDALALALD 240 ERQLKRERRK QANRESAKKS RLRKQAEYEE LLTRWESLNA ENAALKCELE QLKGDSGKLR 300 HENAALMEKL EVRGLAQKGE TVSSNVEADL TLRNNTEKVP NNSITLNRNV KPDRNTHESS 360 NSETKLHQLL GSSSRTDTVA AR |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | XP_010105000.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_024026956.1 | 0.0 | G-box-binding factor 3 | ||||
TrEMBL | W9RY97 | 0.0 | W9RY97_9ROSA; G-box-binding factor 3 | ||||
STRING | XP_010105000.1 | 0.0 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF15470 | 8 | 10 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G46270.1 | 2e-29 | G-box binding factor 3 |
Link Out ? help Back to Top | |
---|---|
Entrez Gene | 21395315 |