PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010104144.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family Dof
Protein Properties Length: 332aa    MW: 36361.9 Da    PI: 7.4709
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010104144.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1291.3e-401778263
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
                    +e+alkcprCdstntkfCyynnysl+qPryfCkaCrryWtkGG+lrnvPvGgg+rknk+sss
  XP_010104144.1 17 PEQALKCPRCDSTNTKFCYYNNYSLTQPRYFCKACRRYWTKGGTLRNVPVGGGCRKNKRSSS 78
                    6899******************************************************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074781.0E-291575IPR003851Zinc finger, Dof-type
PfamPF027016.2E-341975IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.5252175IPR003851Zinc finger, Dof-type
PROSITE patternPS0136102359IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005730Cellular Componentnucleolus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MLVGSKPQQE RKPRPHPEQA LKCPRCDSTN TKFCYYNNYS LTQPRYFCKA CRRYWTKGGT  60
LRNVPVGGGC RKNKRSSSSS SSASSSSTSS FSSSILSKRG QDHHNPPTHH LPLPLGAYDS  120
NDLTLAFARL QKQSCEQLGF DHHGHDHHDH HHHLSILGNP NGNQHCDMIG NPNPGSFLDV  180
LRNGFLESQN TTTNNSTTNS FHNLYYGFGS GNIIGDQIDQ NGENCGGTVG ISGGDQTMIN  240
GLPYDHDQEM ISNATTTAVA VTTIKQELCN GISNKDHHQI SNENRVLWGC PWQINGSDHG  300
SGMGDFDAAA GRESWNGIAS SWHGLLNTTP LM
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010104144.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHM3665467e-69HM366546.1 Prunus persica clone PpDOF1 Dof-type zinc finger domain-containing protein mRNA, complete cds.
GenBankHM3665477e-69HM366547.1 Prunus persica clone PpDOF2 Dof-type zinc finger domain-containing protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010104144.20.0dof zinc finger protein DOF2.1
TrEMBLW9RMR90.0W9RMR9_9ROSA; Dof zinc finger protein
STRINGXP_010104144.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF50263051
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.18e-39TARGET OF MONOPTEROS 6