PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010103855.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bZIP
Protein Properties Length: 574aa    MW: 64765.8 Da    PI: 9.9388
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010103855.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1231.7e-07181204427
                     XCHHHCHHHHHHHHHHHHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkae 27 
                      +++rr++kNRe+A rsR+RK+ +
  XP_010103855.1 181 QQKQRRMIKNRESAARSRERKQPK 204
                     689******************966 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.8E-12175202No hitNo description
SMARTSM003380.0039178279IPR004827Basic-leucine zipper domain
CDDcd147076.53E-13182273No hitNo description
SuperFamilySSF579598.16E-5183208No hitNo description
PROSITE patternPS000360185200IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.8E-12240272No hitNo description
TIGRFAMsTIGR002792.7E-76355528IPR001197Ribosomal protein L10e
Gene3DG3DSA:3.90.1170.101.1E-95358527IPR016180Ribosomal protein L10e/L16
SuperFamilySSF546869.03E-75358527IPR016180Ribosomal protein L10e/L16
PfamPF002525.0E-40366520IPR016180Ribosomal protein L10e/L16
CDDcd014334.67E-44395520IPR016180Ribosomal protein L10e/L16
PROSITE patternPS012570462483IPR018255Ribosomal protein L10e, conserved site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006412Biological Processtranslation
GO:0032502Biological Processdevelopmental process
GO:0071493Biological Processcellular response to UV-B
GO:0005730Cellular Componentnucleolus
GO:0005774Cellular Componentvacuolar membrane
GO:0009507Cellular Componentchloroplast
GO:0022625Cellular Componentcytosolic large ribosomal subunit
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0003735Molecular Functionstructural constituent of ribosome
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 574 aa     Download sequence    Send to blast
MASSNVVIAS ASPTTNSELP RQSSICSLST FIADLHHNQT HDDDDEEEEA SRNLASVAAM  60
DDILKSIYSE SPQPQQLQDH PSESPFPADG VDEVWKRIVA GGTDRRAEVV GGGGDGGAMT  120
LEDFLSKNGA VREEDVMVAV GGYGQFQAAP MVVYGNGSGA ATPAARVRRR VVEEPLDKAT  180
QQKQRRMIKN RESAARSRER KQPKSAYLVG GESGMRGLVE GFLDPWFFVG EKRKNGMGWA  240
YTVELESLVT QLEEENTRLL REQAEWYEER RKQLMENLVP FLEKKENKKI KEKEIVENFH  300
LQVEKRRTFT LIPVVEKNEE MEKEIAEKLL LQDGWSIADF RVFVRSRRQS TDFAMGRRPA  360
RCYRQIKNKP YPKSRFCRGV PDSKIRIYDV GMKKKGVDEF PFCVHLVSWE KENVSSEALE  420
AARIACNKYM AKYAGKDAFH LRVRVHPFHV LRINKMLSCA GADRLQTGMR GAFGKPQGTC  480
ARVSIGQVLL SVRCKDSNSH HAQEALRRAK FKFPGRQKII VSRKWGFTKF NRNDYVKLKS  540
ENRIQSDGVN AKLLGCHGPL AKRQPGRAFL PASA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4v7e_CI1e-142355570121660S ribosomal protein L16
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010103855.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024026165.11e-179bZIP transcription factor 12
TrEMBLW9RLX20.0W9RLX2_9ROSA; 60S ribosomal protein L10
STRINGXP_010103855.10.0(Morus notabilis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03970.12e-21G-box binding factor 4