PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010103762.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family CO-like
Protein Properties Length: 464aa    MW: 52506.9 Da    PI: 6.1055
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010103762.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box30.67.1e-102265340
        zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40
                    +r C+++ +k+++++C  ++ +lC+ C l+ H+       H++v
  XP_010103762.1 22 ARACDNCVKKRARWYCAADDAFLCQACDLSVHSAnslarrHERV 65
                    578*****************************657788888876 PP
2CCT67.53.8e-23407450144
             CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 
                     Rea+++RY+eKr+tR+F+KkirYe+RK +Ae+RpR+KGrFv +a
  XP_010103762.1 407 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVNRA 450
                     9****************************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003367.5E-112067IPR000315B-box-type zinc finger
PROSITE profilePS5011911.1062067IPR000315B-box-type zinc finger
PfamPF006433.7E-82265IPR000315B-box-type zinc finger
CDDcd000212.78E-102367No hitNo description
PfamPF062031.3E-17407448IPR010402CCT domain
PROSITE profilePS5101715.775407449IPR010402CCT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0016020Cellular Componentmembrane
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 464 aa     Download sequence    Send to blast
MSCSYKNIHK VVSNGVVGGK TARACDNCVK KRARWYCAAD DAFLCQACDL SVHSANSLAR  60
RHERVRLKTA SSSSLIKPLP TEESDLTAPT WHRGFTRKAR TPRNGKNHVT HPKLQKNQSR  120
DHHHHHQQFD PLVPEICSDE TSHEENEDQL LYRVPIFDPF VAELCTANSA NSNGLIESKA  180
VSPSVNDCGG AHEVENTNMQ QFLPTEMDLA EFAADVDSLL GRGLENECFG IEGLGFVDCE  240
EKEMGRLVKV KEEEEEDEGK DLKGCSWVET SSTDIDMMRP EPLELNFEDY EDSPALCDEE  300
EDQKVALVEA DKAVAEAETK NDEDEEKKGK KKKKKKKILL RLDYEAVITA WASQGSPWTT  360
GDRPDFDPDA CWPDCMGTYY PTQLHHHQYM DLSGVELNPA ILADGGREAR VSRYREKRRT  420
RLFSKKIRYE VRKLNAEKRP RMKGRFVNRA SFAGPTFPAM LITK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1326334KKGKKKKKK
2330336KKKKKKK
3417433RRTRLFSKKIRYEVRKL
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010103762.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010103762.10.0zinc finger protein CONSTANS-LIKE 16
TrEMBLW9SB570.0W9SB57_9ROSA; Zinc finger protein CONSTANS-LIKE 16
STRINGXP_010103762.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14733392
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25440.13e-99B-box type zinc finger protein with CCT domain