PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010103258.1

Organism

Morus notabilis

Taxonomic ID

981085

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Family

Nin-like

Protein Properties

Length: 371aa MW: 42672.1 Da PI: 10.2125

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010103258.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	85.2	5.8e-27	244	293	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++i l+dl+kyF+lpi++A+k+L+v+lTvLK++CR++GI+RWPhRkiksl XP_010103258.1 244 ARIALSDLAKYFDLPITEASKNLKVGLTVLKKKCREFGIPRWPHRKIKSL 293 6899********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	18.929	226	314	IPR003035	RWP-RK domain
Pfam	PF02042	5.4E-22	246	293	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence Send to blast
MDSTSKTKTH FLTSLLVFNN TINRELMRSL HVYRLMNGKE SEVEREREFV FSANGPYVEM 60 AVDPLLRLLK FNNPTTSEVF EGFVNGLWIC IFAFHAHPHH LSCNIPSMIS LSRNPKLMSI 120 PSLANDLQMI FRLNSISDDK EPSRVLPQGT CRRNNEIHHQ IRINFPVLDQ DLNCLPYPVT 180 KSDLSDDQQI EQSSSVTKSD LSDDQQIEQS SSVVARYFVS HRQKVAAAGI VEKKKKRAAS 240 KDIARIALSD LAKYFDLPIT EASKNLKVGL TVLKKKCREF GIPRWPHRKI KSLDGLIHDL 300 QEERKCQQQG NKAAEIAVAK RQRMLESEKE SIERKPFLEM KSETKRFRQD VFKRRHRARV 360 LRTQALSISS T

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence Send to blast

MDSTSKTKTH FLTSLLVFNN TINRELMRSL HVYRLMNGKE SEVEREREFV FSANGPYVEM  60
AVDPLLRLLK FNNPTTSEVF EGFVNGLWIC IFAFHAHPHH LSCNIPSMIS LSRNPKLMSI  120
PSLANDLQMI FRLNSISDDK EPSRVLPQGT CRRNNEIHHQ IRINFPVLDQ DLNCLPYPVT  180
KSDLSDDQQI EQSSSVTKSD LSDDQQIEQS SSVVARYFVS HRQKVAAAGI VEKKKKRAAS  240
KDIARIALSD LAKYFDLPIT EASKNLKVGL TVLKKKCREF GIPRWPHRKI KSLDGLIHDL  300
QEERKCQQQG NKAAEIAVAK RQRMLESEKE SIERKPFLEM KSETKRFRQD VFKRRHRARV  360
LRTQALSISS T

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010103258.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024025777.1	0.0	protein RKD5
TrEMBL	W9RTJ6	0.0	W9RTJ6_9ROSA; Uncharacterized protein
STRING	XP_010103258.1	0.0	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF9646	30	42

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35590.1	2e-89	RWP-RK domain-containing protein

Link Out ? help Back to Top
Entrez Gene	21390488