PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010102121.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | WRKY | ||||||||
Protein Properties | Length: 258aa MW: 27828.8 Da PI: 5.2073 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 95.3 | 4.4e-30 | 71 | 129 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp++++itY +Hnh+ XP_010102121.1 71 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPTTLIITYACNHNHP 129 69*************************998****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 2.1E-31 | 62 | 131 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.44E-25 | 66 | 131 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.4E-34 | 70 | 130 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 32.087 | 71 | 131 | IPR003657 | WRKY domain |
Pfam | PF03106 | 6.0E-25 | 72 | 129 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence Send to blast |
MDRRFSSADT EEYAEPVSEN GPDSPSSGDD MTKTAKPSPK KSKRGVQKRV VSVPIGDVEG 60 SKSKGEAYPP SDSWAWRKYG QKPIKGSPYP RGYYRCSSSK GCPARKQVER SRVDPTTLII 120 TYACNHNHPV PTKSHSSTSA PASATSAAMI SDEVLAKTPA EIVVFSGESD IEIGDALLDG 180 YHHQWFDDVA STAVLESPIY GGAYVDADVS TAFSAVSGED ESLFADLGEL PECSVVFRRR 240 IVEPEEQNRR CGLSAVTG |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 1e-20 | 48 | 132 | 6 | 80 | Disease resistance protein RRS1 |
5w3x_D | 1e-20 | 48 | 132 | 6 | 80 | Disease resistance protein RRS1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010102121.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HG983333 | 1e-100 | HG983333.1 Humulus lupulus mRNA for WRKY transcription factor (Wrky3 gene), clone 3323. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010102121.1 | 0.0 | probable WRKY transcription factor 69 | ||||
Swissprot | Q93WV5 | 5e-78 | WRK69_ARATH; Probable WRKY transcription factor 69 | ||||
TrEMBL | W9RQF6 | 0.0 | W9RQF6_9ROSA; Putative WRKY transcription factor 69 | ||||
STRING | XP_010102121.1 | 0.0 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2770 | 34 | 75 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58710.1 | 4e-73 | WRKY DNA-binding protein 69 |
Link Out ? help Back to Top | |
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Entrez Gene | 21404214 |
Publications ? help Back to Top | |||
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