PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010102085.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ZF-HD
Protein Properties Length: 361aa    MW: 40182.9 Da    PI: 7.9282
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010102085.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer101.46.4e-32103160260
     ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                     ++v+Y+eClkNhAas+Gg+++DGCgEfmp+ g+eg+ +alkCaAC+CHRnFHR+e + e
  XP_010102085.1 103 SAVKYRECLKNHAASVGGNVFDGCGEFMPN-GQEGSLEALKCAACQCHRNFHRKEIDGE 160
                     5799*************************8.999********************98865 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF047704.3E-29105157IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015661.8E-29106157IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257742.0E-21107158IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152326.856107156IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Gene3DG3DSA:1.10.10.601.3E-30256320IPR009057Homeodomain-like
SuperFamilySSF466897.56E-20256319IPR009057Homeodomain-like
TIGRFAMsTIGR015655.4E-28258314IPR006455Homeodomain, ZF-HD class
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009737Biological Processresponse to abscisic acid
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
MEFRAQESDQ MRTTSTGSLN YTHLTKDQSP GAERRKSLIT STNGNSTSNC TTQTLDNIYP  60
RSFQHQPVQL HAQQPLRDPD NKSPDPMPFS PLSAVTKTKT TSSAVKYREC LKNHAASVGG  120
NVFDGCGEFM PNGQEGSLEA LKCAACQCHR NFHRKEIDGE TQLYSPGSRR SSTTTTTALM  180
LNPLQLTPPL PSPSLHHHHP NHHPHHHHHL HKYPIVQPMN VAFGGVAAAG TESSSEDLNV  240
YGQSTAEGVP PPPFALSKKR FRTKFTQEQK ERMLEFAEKV GWRIQKQDEV EVERFCAEVG  300
VKRQVLKVWM HNNKSAVKKQ QEMMMMMGTT NNNSNTSAGN IHDNMQSLEV SEAVEDGGLD  360
T
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wh7_A2e-262593161875ZF-HD homeobox family protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor. Binds DNA at 5'-ATTA-3' consensus promoter regions. Regulates floral architecture and leaf development. Regulators in the abscisic acid (ABA) signal pathway that confers sensitivity to ABA in an ARF2-dependent manner. {ECO:0000269|PubMed:16428600, ECO:0000269|PubMed:21059647, ECO:0000269|PubMed:21779177}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00238DAPTransfer from AT1G75240Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010102085.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by abscisic acid (ABA) and ARF2. {ECO:0000269|PubMed:21779177}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010102085.10.0zinc-finger homeodomain protein 5
SwissprotQ9FRL52e-68ZHD5_ARATH; Zinc-finger homeodomain protein 5
TrEMBLW9S6C30.0W9S6C3_9ROSA; Uncharacterized protein
STRINGXP_010102085.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20634253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02540.12e-55homeobox protein 21