PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010102025.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | NAC | ||||||||
Protein Properties | Length: 509aa MW: 57522.5 Da PI: 8.0358 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 151.7 | 3.5e-47 | 18 | 144 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 + pGfrF+Ptdeel+++yLk+k++g + ++ evi+ev+i k+ePw+L k+v +e+ew+fFs+r +ky++g++++rat+ gyWkatgk+++v+s XP_010102025.1 18 MFPGFRFSPTDEELISYYLKNKMDGADKSV-EVIPEVEIWKYEPWELLdKSVIPSETEWFFFSPRGRKYPNGSQSKRATELGYWKATGKERNVKS 111 579************************999.99**************7566666899************************************** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +g+k+tLvf++grapkge+t+W+mhey + XP_010102025.1 112 -GSTFIGTKRTLVFHTGRAPKGERTEWIMHEYCV 144 .999****************************75 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.93E-54 | 10 | 159 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 52.095 | 18 | 160 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.7E-25 | 20 | 143 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0071333 | Biological Process | cellular response to glucose stimulus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0016021 | Cellular Component | integral component of membrane | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 509 aa Download sequence Send to blast |
MAGAPSREAQ MSIAALSMFP GFRFSPTDEE LISYYLKNKM DGADKSVEVI PEVEIWKYEP 60 WELLDKSVIP SETEWFFFSP RGRKYPNGSQ SKRATELGYW KATGKERNVK SGSTFIGTKR 120 TLVFHTGRAP KGERTEWIMH EYCVLDKSQD FMVVCRLRKN SEFRLNDSNR ASSSQRPLST 180 MHNSNCAASE VGTEPGDKAN ECCSKKCSSS YDSYSIEQID SASESSQKLA SEVTQPECSG 240 QQKDYDDDDD FFAEILKDDI IKLDETLISA ALDISPLAAF VPEEVQKSQQ PGEAAVSQDL 300 PFQGTANRRI RLKKETVRTN REKAMENTAS TKSDYLVGKN TRPNSKESPK CSASVLSART 360 TASRHLILAV FLLLAFMALF ASLLGGFWRV RMTICFVTTP CKMSRPMLLV FLLLILIITS 420 QFEWKQPVID VDMNPSISQK QQRISKREEA VKEKIILSQE KNIQRLNELV RSLREQLHQC 480 RGNNEKANAT VRPLTEHVLG LERQQLLEG |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 4e-43 | 13 | 159 | 12 | 164 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 4e-43 | 13 | 159 | 12 | 164 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 4e-43 | 13 | 159 | 12 | 164 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 4e-43 | 13 | 159 | 12 | 164 | NO APICAL MERISTEM PROTEIN |
3swm_A | 5e-43 | 13 | 159 | 15 | 167 | NAC domain-containing protein 19 |
3swm_B | 5e-43 | 13 | 159 | 15 | 167 | NAC domain-containing protein 19 |
3swm_C | 5e-43 | 13 | 159 | 15 | 167 | NAC domain-containing protein 19 |
3swm_D | 5e-43 | 13 | 159 | 15 | 167 | NAC domain-containing protein 19 |
3swp_A | 5e-43 | 13 | 159 | 15 | 167 | NAC domain-containing protein 19 |
3swp_B | 5e-43 | 13 | 159 | 15 | 167 | NAC domain-containing protein 19 |
3swp_C | 5e-43 | 13 | 159 | 15 | 167 | NAC domain-containing protein 19 |
3swp_D | 5e-43 | 13 | 159 | 15 | 167 | NAC domain-containing protein 19 |
4dul_A | 4e-43 | 13 | 159 | 12 | 164 | NAC domain-containing protein 19 |
4dul_B | 4e-43 | 13 | 159 | 12 | 164 | NAC domain-containing protein 19 |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 307 | 314 | RRIRLKKE |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (By similarity). Transcription factor involved in modulation of abscisic acid (ABA) signaling. Attenuates ABA sensitivity and glucose-induced ABA accumulation. Reduces the expression of ABI4 gene. {ECO:0000250|UniProtKB:Q949N0, ECO:0000269|PubMed:24625790}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010102025.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By glucose (PubMed:24625790). Induced by salt, drought stress and methyl methanesulfonate (MMS) treatment (PubMed:17158162). {ECO:0000269|PubMed:17158162, ECO:0000269|PubMed:24625790}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024025054.1 | 0.0 | NAC domain-containing protein 60 | ||||
Swissprot | Q9LXL9 | 1e-89 | NAC60_ARATH; NAC domain-containing protein 60 | ||||
TrEMBL | W9RH24 | 0.0 | W9RH24_9ROSA; NAC domain-containing protein 89 | ||||
STRING | XP_010102025.1 | 0.0 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF7315 | 33 | 46 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G44290.1 | 9e-89 | NAC domain containing protein 60 |
Link Out ? help Back to Top | |
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Entrez Gene | 21399367 |
Publications ? help Back to Top | |||
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