PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010101707.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ARR-B
Protein Properties Length: 1004aa    MW: 110337 Da    PI: 7.1352
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010101707.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like56.84.8e-18322372354
         G2-like   3 rlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 
                     r +W peLH++F ea++ L G e+A P+ i+e m+v+g+t+ +++SH QkY+
  XP_010101707.1 322 RSVWDPELHHKFTEAINAL-GDENANPRVIKEKMNVPGITRCQIASHFQKYK 372
                     889****************.9******************************7 PP
2Response_reg493.4e-17261281107
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     +l+vd++ l +  + ++le+  + +v+++++ + al +++e++  + l++  ++mp+md l +l ei++   ++p+i++++ +  + a +al  G
  XP_010101707.1  26 ILLVDEDVLSLFYISSMLEEYSF-KVTTVEQTSVALSMIREQKnkFRLVMANVNMPDMDNLSFLHEIKS---EIPVILMSSDS--SVASKALVEG 114
                     89*********************.***************777777**********************99...57******655..6********* PP

                     ESEEEESS--HHHH CS
    Response_reg  94 akdflsKpfdpeel 107
                     a+ fl Kp+  ++l
  XP_010101707.1 115 ASLFLRKPVTLKDL 128
                     *********99887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23009.4E-2422154No hitNo description
SuperFamilySSF521728.68E-2123135IPR011006CheY-like superfamily
SMARTSM004485.1E-1424132IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011028.5925136IPR001789Signal transduction response regulator, receiver domain
PfamPF000726.6E-1426129IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.65E-1627135No hitNo description
Gene3DG3DSA:1.10.10.606.8E-17318377IPR009057Homeodomain-like
SuperFamilySSF466895.02E-12319377IPR009057Homeodomain-like
PfamPF002494.2E-6322372IPR001005SANT/Myb domain
TIGRFAMsTIGR015574.7E-16322372IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1004 aa     Download sequence    Send to blast
MEMDQMLKEF SVTNTKVPSF ARGLEILLVD EDVLSLFYIS SMLEEYSFKV TTVEQTSVAL  60
SMIREQKNKF RLVMANVNMP DMDNLSFLHE IKSEIPVILM SSDSSVASKA LVEGASLFLR  120
KPVTLKDLKP VWQHVDWNPQ NRKKESHQEN SEEKGGTRKE LRGSKINEPS TLSRSLAEGN  180
IIKEATGRPP SKGKIIKEAG NEAWPSTNLL KPIETGSFSI PIIGCEFHGN LFTNPLSQRM  240
QSKGKITIII DDENNGLQNI EASNKQEGSN LKRQLSEKEG KKQEKKTKTN LEIVNSGSSE  300
INGKGKKKVC GENNNSNKKA WRSVWDPELH HKFTEAINAL GDENANPRVI KEKMNVPGIT  360
RCQIASHFQK YKADIKKNNE TGTRSLPSMS QPLCSHAMTA FAPTVEMQNP LISEHGQENL  420
NFGVAGTQST IPKPPTQPEG NIYRAELLRI NKARTTNLPS LIQPYCKHAR TALPSPIERQ  480
SSLISQHGQR NFNFGVTGNK QSTIPEQERR CEVQRINETG TSLPFIGQSS CSNARTSFSP  540
PLARQSSLIS KHGQGSINSE VEGNIRSTVQ KSLTQPKVNV GSFVSHGQRA PHLYIGQMGS  600
SCNSNLYHNY NPNKVHIETH GMLQNLNLER ETSSYGVNEK GKGKQPLGLE ESTNQTAKMN  660
LPNAIFEPPT VPSPFMSTSI QVSALNLPNS SHAHPTAPSP YMSAGTQVSE MNLQNSSYTP  720
PRAPAPHVVD ITQVSEVNLP NSSYMPPYVA VNMQVSEMNL PNSSYTPARA PSPYMEAGTH  780
GSEMKLTNSS YAASPYVENG TQVSQMNLPN SGYASPEVPH PYVSTGTQVS EMSLSSSSYA  840
PPRETFPYVS AGTFQYPNSV PYLNENQDLA SAYNSKHQNQ LSVGATGTEV LNSVSPTMIS  900
VGVSGTTEVL NSAPATITSS NATNPQEFQT NISNGGQNLD PFMNQAPAAE SPKQNESFSD  960
YEDILRILDG DAANFNDFAY EPNLDEKGYN WLQKNLNGKD TDPY
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010101707.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLW9RGG70.0W9RGG7_9ROSA; Two-component response regulator
STRINGXP_010101707.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF144041618
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.17e-25response regulator 2