PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010100882.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | ERF | ||||||||
Protein Properties | Length: 180aa MW: 19559.8 Da PI: 7.8324 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 29.1 | 2.5e-09 | 9 | 37 | 27 | 55 |
AP2 27 krkrfslgkfgtaeeAakaaiaarkkleg 55 +++r++lg+f tae Aa+a+++a+ l g XP_010100882.1 9 RKRRVWLGTFETAEAAARAYDEAAILLTG 37 369********************987776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 14.17 | 1 | 45 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 7.3E-13 | 5 | 51 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.1E-17 | 9 | 46 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.1E-5 | 9 | 33 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.05E-11 | 9 | 46 | IPR016177 | DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence Send to blast |
MLLLSTCDRK RRVWLGTFET AEAAARAYDE AAILLTGRNA KTNFPAKTQN SGDRNSSPTS 60 PAATSQKGLS EILRAKLSKC GKKTSSPSVT CLRLDTDSCN IGVWQKRGGS KNANWVLTTA 120 LGKVDEGSPD QRSSTSSELT PAREEERSTQ IRGDDQEDSV AVLQMIEELL HMNSPNCEPN |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Promotes cuticle formation by inducing the expression of enzymes involved in wax biosynthesis. Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:15319479}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010100882.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By wounding in cauline leaves, stems, and siliques, but not in rosette leaves. {ECO:0000269|PubMed:15319479}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010100882.2 | 1e-123 | ethylene-responsive transcription factor WIN1 | ||||
Swissprot | Q3E958 | 2e-39 | SHN3_ARATH; Ethylene-responsive transcription factor SHINE 3 | ||||
TrEMBL | W9RDW9 | 1e-129 | W9RDW9_9ROSA; Ethylene-responsive transcription factor SHINE 3 | ||||
STRING | XP_010100882.1 | 1e-130 | (Morus notabilis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25390.2 | 3e-31 | ERF family protein |
Link Out ? help Back to Top | |
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Entrez Gene | 21406451 |
Publications ? help Back to Top | |||
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