PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010100306.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ARR-B
Protein Properties Length: 576aa    MW: 64470.8 Da    PI: 5.3717
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010100306.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like772.4e-24200253155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     k+r++W+ +LH++Fv+av+q+ G +k  Pk+il+lm+v+ Lt+e+v+SHLQkYRl
  XP_010100306.1 200 KARVVWSVDLHQKFVKAVNQI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 253
                     68*******************.9*******************************8 PP
2Response_reg80.36.6e-27191271109
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     vl+vdD+p+ +++l+++l+k  y ev+++  +++al+ll+e++  +D+++ D++mp+mdG++ll++   e  +lp+i+++  ge + + + ++ G
  XP_010100306.1  19 VLVVDDDPTWLRILEKMLKKCSY-EVTTCGLATDALRLLRERKdvFDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHG 111
                     89*********************.***************999999**********************6644.8********************** PP

                     ESEEEESS--HHHHHH CS
    Response_reg  94 akdflsKpfdpeelvk 109
                     a d+l Kp+ ++el +
  XP_010100306.1 112 ACDYLLKPIRMKELKN 127
                     ************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23005.3E-4416147No hitNo description
SuperFamilySSF521722.56E-3516139IPR011006CheY-like superfamily
SMARTSM004481.1E-3117129IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011043.15218133IPR001789Signal transduction response regulator, receiver domain
PfamPF000724.6E-2419127IPR001789Signal transduction response regulator, receiver domain
CDDcd001568.51E-3020133No hitNo description
Gene3DG3DSA:1.10.10.608.5E-28198258IPR009057Homeodomain-like
SuperFamilySSF466894.48E-17198257IPR009057Homeodomain-like
TIGRFAMsTIGR015571.7E-21200253IPR006447Myb domain, plants
PfamPF002491.8E-7202252IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009735Biological Processresponse to cytokinin
GO:0010082Biological Processregulation of root meristem growth
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 576 aa     Download sequence    Send to blast
MENGFSSPRS DAFPAGLRVL VVDDDPTWLR ILEKMLKKCS YEVTTCGLAT DALRLLRERK  60
DVFDIVISDV NMPDMDGFKL LEHVGLEMDL PVIMMSVDGE TSRVMKGVQH GACDYLLKPI  120
RMKELKNIWQ HVFRKKIHEI KDIENHESII EGMHLTRNGS DYSDDGHLLS VDDLTSVRKR  180
KDMEKNHDEK DFSDASSAKK ARVVWSVDLH QKFVKAVNQI GFDKVGPKKI LDLMNVPWLT  240
RENVASHLQK YRLYLSRLQK EKENSGMKHS DASPKDPPGS FGSIHQSDVV NSSYLFSGNS  300
LLPRTVDPSS HEDDLKSIIS EPVMEPKRPP VNLPDSHKTK NSQMGFNRSF QPLESEVDFA  360
AFNSGIPTKS YWGEVPDVQF GQEHTPFVHL ENGFTKLPLP DPLNHVNADS LQSIPCTAER  420
GISGPTKSKP PCPEYGSNQI SDPSPKVSIL DPFPQSSKSN IVNHQRALEP IYPCTSSLTT  480
QASCLSCTAD IESAQRDVLN LASGSSSTLA SFEDDLQVLF QGDSYGDTLG VRNLGFSDYI  540
DAGLINEVPI HLYDSLRFGY EYPCDMTEYA ILDQAY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A1e-17196258163ARR10-B
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00010PBMTransfer from AT1G67710Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010100306.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010100306.10.0two-component response regulator ARR11
TrEMBLW9RKG50.0W9RKG5_9ROSA; Two-component response regulator
STRINGXP_010100306.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF39993360
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67710.11e-130response regulator 11