PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010099375.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 230aa    MW: 25508.2 Da    PI: 9.4994
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010099375.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.74.8e-1475121354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h+e+E+rRR+riN  f++Lr l+P a     kK++Ka+ L +++ ++k+L
  XP_010099375.1  75 KNHSEAEKRRRARINAHFDTLRGLIPGA-----KKMDKASLLAEVISHLKDL 121
                     58*************************9.....9****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.49472121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.08E-1275124No hitNo description
PfamPF000107.4E-1275121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.9E-1576131IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.45E-1576132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-1378127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MGSFCWSSGV YNSGFQRTND GVLVNSGMRY GPASALALAS SSSLVLDSVR GELVEAPVKL  60
ERKMVSAEKS VEALKNHSEA EKRRRARINA HFDTLRGLIP GAKKMDKASL LAEVISHLKD  120
LKRKAAEASE DSDCVIPKDI DEVKVEPDHK QALDALHLIT KRAEIATLGC RMKNVFVMTT  180
SKEENDEVCR FYARSVCQAL RAVLEKFSAS EEFLKSPHSN KRRRVSVFNP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1220224KRRRV
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010099375.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015881324.18e-88transcription factor bHLH30-like
TrEMBLW9RKA91e-168W9RKA9_9ROSA; Uncharacterized protein
STRINGXP_010099375.11e-168(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106852538
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.13e-22bHLH family protein