PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010098698.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 366aa    MW: 40859.4 Da    PI: 5.2749
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010098698.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH421.7e-13147198155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i+  A++++k+L+
  XP_010098698.1 147 QRMTHIAVERNRRKQMNEYLAVLRSLMPPS---YVQRGDQASIVGGAINFVKELE 198
                     79****************************...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000839.79E-14145202No hitNo description
SuperFamilySSF474591.31E-16146212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.478146197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.4E-11147198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-13147214IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.9E-10152203IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    Send to blast
MALETVVFSQ DPFGYGFKDF YSLLGGPGGA NWGYDLCLQQ QQEDQESLEE DKSLIGIFDN  60
RILDQTVHAN WDYSSSPPSV PHNINNELGI MSDPYSSPEA CTVDQSYSPP ASADPAVAEQ  120
APSTATVGRR KRRRTRSSKN KEELENQRMT HIAVERNRRK QMNEYLAVLR SLMPPSYVQR  180
GDQASIVGGA INFVKELEQF LQSMESQHKR AKKQDKDEDG FSSPVSSPSS SPLAEFFTFP  240
QYSTRATAQN ASTENRDSSV NNNNNNNNNN NSNRWAAADI EVTMVDSHAN LKILSKKRPR  300
LLLKMVASLQ ALHFSILHLN VTTVDQMVLY SVSVKIEEGC QLNTVDEIAA AVNQMLGRIQ  360
EEPSFT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1129133RKRRR
2129134RKRRRT
3147158RMTHIAVERNRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010098698.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010098698.10.0transcription factor bHLH96
SwissprotQ9C7T46e-93BH096_ARATH; Transcription factor bHLH96
TrEMBLW9R7Y40.0W9R7Y4_9ROSA; Uncharacterized protein
STRINGXP_010098698.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF71834135
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.13e-85bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]